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Protein

Syntaxin-binding protein 5-like

Gene

Stxbp5l

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

May play a role in vesicle trafficking and exocytosis.Curated

GO - Molecular functioni

  • syntaxin binding Source: MGI

GO - Biological processi

  • exocytosis Source: UniProtKB-KW
  • glucose homeostasis Source: MGI
  • negative regulation of insulin secretion Source: MGI
  • positive regulation of protein secretion Source: MGI
  • protein transport Source: UniProtKB-KW
  • regulation of exocytosis Source: MGI
Complete GO annotation...

Keywords - Biological processi

Exocytosis, Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Syntaxin-binding protein 5-like
Alternative name(s):
Lethal(2) giant larvae protein homolog 4
Tomosyn-2
Gene namesi
Name:Stxbp5l
Synonyms:Llgl4
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 16

Organism-specific databases

MGIiMGI:2443815. Stxbp5l.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: UniProtKB-SubCell
  • integral component of membrane Source: InterPro
  • plasma membrane Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Cytoplasm, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11851185Syntaxin-binding protein 5-likePRO_0000051248Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionineBy similarity
Modified residuei567 – 5671PhosphothreonineCombined sources
Modified residuei573 – 5731PhosphoserineCombined sources
Modified residuei588 – 5881PhosphoserineCombined sources
Modified residuei595 – 5951PhosphothreonineCombined sources
Modified residuei598 – 5981PhosphoserineCombined sources
Modified residuei792 – 7921PhosphoserineCombined sources
Modified residuei822 – 8221PhosphoserineCombined sources
Modified residuei1092 – 10921PhosphothreonineCombined sources

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

EPDiQ5DQR4.
MaxQBiQ5DQR4.
PaxDbiQ5DQR4.
PRIDEiQ5DQR4.

PTM databases

iPTMnetiQ5DQR4.
PhosphoSiteiQ5DQR4.

Expressioni

Tissue specificityi

Detected in hippocampus and cerebellum.1 Publication

Gene expression databases

BgeeiQ5DQR4.
CleanExiMM_STXBP5L.

Interactioni

GO - Molecular functioni

  • syntaxin binding Source: MGI

Protein-protein interaction databases

IntActiQ5DQR4. 2 interactions.
STRINGi10090.ENSMUSP00000110435.

Structurei

3D structure databases

ProteinModelPortaliQ5DQR4.
SMRiQ5DQR4. Positions 515-544, 639-671, 1121-1177.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati73 – 10634WD 1Add
BLAST
Repeati113 – 15240WD 2Add
BLAST
Repeati157 – 19337WD 3Add
BLAST
Repeati212 – 24635WD 4Add
BLAST
Repeati252 – 28433WD 5Add
BLAST
Repeati306 – 34843WD 6Add
BLAST
Repeati356 – 39035WD 7Add
BLAST
Repeati412 – 48978WD 8Add
BLAST
Repeati517 – 628112WD 9Add
BLAST
Repeati642 – 70463WD 10Add
BLAST
Repeati831 – 88858WD 11Add
BLAST
Repeati897 – 96872WD 12Add
BLAST
Repeati973 – 101745WD 13Add
BLAST
Repeati1031 – 105424WD 14Add
BLAST
Domaini1120 – 118061v-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the WD repeat L(2)GL family.Curated
Contains 1 v-SNARE coiled-coil homology domain.PROSITE-ProRule annotation
Contains 14 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Repeat, WD repeat

Phylogenomic databases

eggNOGiENOG410INFH. Eukaryota.
ENOG410XTER. LUCA.
GeneTreeiENSGT00390000000018.
HOVERGENiHBG083064.
InParanoidiQ5DQR4.
KOiK08518.
OMAiMCDNLQE.
OrthoDBiEOG7DVD96.
PhylomeDBiQ5DQR4.
TreeFamiTF314585.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR000664. Lethal2_giant.
IPR013905. Lgl_C_dom.
IPR013577. LLGL2.
IPR001388. Synaptobrevin.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08596. Lgl_C. 1 hit.
PF08366. LLGL. 1 hit.
PF00400. WD40. 1 hit.
[Graphical view]
PRINTSiPR00962. LETHAL2GIANT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 6 hits.
PROSITEiPS50892. V_SNARE. 1 hit.
PS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequences (7)i

Sequence statusi: Complete.

This entry describes 7 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q5DQR4-1) [UniParc]FASTAAdd to basket

Also known as: Tomosyn-2 isoform xb

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MKKFNFRKVL DGLTASSPGS GSSSGSNSGG AGSGSVHPGG TAGLPREEIQ
60 70 80 90 100
ESLTSDYFQI CKTVRHGFPY QPTALAFDPV QKILAIGTRT GAIRILGRPG
110 120 130 140 150
VDCYCQHESG AAVLQLQFLI NEGALVSASS DDTLHLWNLR QKRPAILHSL
160 170 180 190 200
KFNRERITYC HLPFQSKWLY VGTERGNTHI VNIESFILSG YVIMWNKAIE
210 220 230 240 250
LSTKTHPGPV VHLSDSPRDE GKLLIGYENG TVVFWDLKSK RAELRVYYDE
260 270 280 290 300
AIHSIDWHHE GKQFMCSHSD GSLTLWNLKS PSRPFQTTVP HGKSQREGRK
310 320 330 340 350
SESCKPILKV EYKTCRNSEP FIIFSGGLSY DKACRRPSLT IMHGKAITVL
360 370 380 390 400
EMDHPIVEFL TLCETPYPNE FQEPYAVAVL LEKDLIVVDL TQTNFPIFEN
410 420 430 440 450
PYPMDIHESP VTCTAYFADC PPDLILVLYS IGVKHKKQGY SNKEWPVSGG
460 470 480 490 500
AWNLGAQTYP EIIITGHADG TIKFWDASAM TLQMLYKLKT SKVFEKQKAG
510 520 530 540 550
EGKQTCELVE EDPFAVQMIY WCPESRIFCV SGVSAYVIIY KFSRHEVTTE
560 570 580 590 600
IVSLEVRLQC DVEDIITPEP ETSPPFPDLS SQLPPSRSLS GSTNTVSSEG
610 620 630 640 650
VTKDSIPCLS VKTRPVRMPP GYQADLVIQL VWVDGEPPQQ ITSLSISSAY
660 670 680 690 700
GIVAFGNCTG LVVVDFIQKT VLLSMGTIDL YRSSDLYQRQ PRSPRKNRQF
710 720 730 740 750
IADNFCMRGL SNFYPDLTKR IRTSYQSLTE LNDSPVPLEL ERCKSPTSDH
760 770 780 790 800
VNGHCTSPTS QSCSSGKRLS SADVSKVNRW GPGRPPFRKA QSAACMEISL
810 820 830 840 850
PVTTEETREN SYNRSRSSSI SSIDKDSKEA ITALYFMESF ARKNDSTVSP
860 870 880 890 900
CLFVGTSLGM VVLISLNLPS SDEQRFTEPV VVLPSGTFLS LKGAVLTFSC
910 920 930 940 950
MDRTGSLMQP PYEVWRDPNN TDENEKTWKR KLVMNYSSSS QEMGDHQYTI
960 970 980 990 1000
ICSEKQAKVF SLPSQTCLYV HNITETSFIL QADVVVMCNS ACLACFCANG
1010 1020 1030 1040 1050
HIMIMSLPSL RPMLDVNYLP LTDMRIARTF CFTNEGQALY LVSPTEIQRL
1060 1070 1080 1090 1100
TYSQEMCDNI QDMLGDLFTP IETPEAQNRG FLKGLFGGSG QTFDREELFG
1110 1120 1130 1140 1150
EASAGKASRS LAQHIPGPGS IEGMKGAAGG VMGELTRARI ALDERGQRLG
1160 1170 1180
ELEEKTAGMM TSAEAFSKHA HELMLKYKDK KWYQF
Length:1,185
Mass (Da):131,844
Last modified:March 29, 2005 - v1
Checksum:i0F797A5CF20E05DC
GO
Isoform 2 (identifier: Q5DQR4-2) [UniParc]FASTAAdd to basket

Also known as: Tomosyn-2 isoform m

The sequence of this isoform differs from the canonical sequence as follows:
     749-805: Missing.

Show »
Length:1,128
Mass (Da):125,805
Checksum:i47124F194BC9517B
GO
Isoform 3 (identifier: Q5DQR4-3) [UniParc]FASTAAdd to basket

Also known as: Tomosyn-2 isoform b

The sequence of this isoform differs from the canonical sequence as follows:
     703-727: DNFCMRGLSNFYPDLTKRIRTSYQS → G

Show »
Length:1,161
Mass (Da):128,906
Checksum:iC5F84EE231D77E22
GO
Isoform 4 (identifier: Q5DQR4-4) [UniParc]FASTAAdd to basket

Also known as: Tomosyn-2 isoform s

The sequence of this isoform differs from the canonical sequence as follows:
     703-727: DNFCMRGLSNFYPDLTKRIRTSYQS → G
     749-805: Missing.

Show »
Length:1,104
Mass (Da):122,866
Checksum:i433FE26AE29E1903
GO
Isoform 5 (identifier: Q5DQR4-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     703-727: DNFCMRGLSNFYPDLTKRIRTSYQS → G
     1006-1025: SLPSLRPMLDVNYLPLTDMR → RYMVYLLLTDNHNNASKVKW
     1026-1185: Missing.

Show »
Length:1,001
Mass (Da):111,411
Checksum:i03E8C91B2C5F16E4
GO
Isoform 6 (identifier: Q5DQR4-6) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     467-1185: Missing.

Show »
Length:466
Mass (Da):51,948
Checksum:i85DC0F23D3781F2E
GO
Isoform 7 (identifier: Q5DQR4-7) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     157-1185: Missing.

Show »
Length:156
Mass (Da):16,726
Checksum:i6C22D96E34DFFDB9
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei157 – 11851029Missing in isoform 7. 1 PublicationVSP_016300Add
BLAST
Alternative sequencei467 – 1185719Missing in isoform 6. 1 PublicationVSP_016299Add
BLAST
Alternative sequencei703 – 72725DNFCM…TSYQS → G in isoform 3, isoform 4 and isoform 5. 2 PublicationsVSP_016295Add
BLAST
Alternative sequencei749 – 80557Missing in isoform 2 and isoform 4. 1 PublicationVSP_016296Add
BLAST
Alternative sequencei1006 – 102520SLPSL…LTDMR → RYMVYLLLTDNHNNASKVKW in isoform 5. 1 PublicationVSP_016297Add
BLAST
Alternative sequencei1026 – 1185160Missing in isoform 5. 1 PublicationVSP_016298Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY542354
, AY542328, AY542329, AY542331, AY542330, AY542332, AY542334, AY542336, AY542338, AY542340, AY542349, AY542348, AY542347, AY542346, AY542345, AY542344, AY542343, AY542342, AY542341, AY542353, AY542352, AY542351, AY542350, AY542339, AY542337, AY542335, AY542333 Genomic DNA. Translation: AAT68171.1.
AY542354
, AY542328, AY542329, AY542330, AY542332, AY542335, AY542334, AY542333, AY542331, AY542336, AY542345, AY542344, AY542343, AY542342, AY542341, AY542340, AY542339, AY542338, AY542337, AY542353, AY542352, AY542351, AY542350, AY542349, AY542347 Genomic DNA. Translation: AAT68172.1.
AY542354
, AY542328, AY542329, AY542331, AY542332, AY542330, AY542333, AY542335, AY542337, AY542340, AY542349, AY542348, AY542347, AY542345, AY542338, AY542344, AY542343, AY542342, AY542341, AY542353, AY542352, AY542351, AY542350, AY542339, AY542336, AY542334 Genomic DNA. Translation: AAT68173.1.
AY542354
, AY542329, AY542330, AY542328, AY542331, AY542333, AY542335, AY542337, AY542346, AY542345, AY542344, AY542343, AY542342, AY542341, AY542340, AY542339, AY542338, AY542353, AY542352, AY542351, AY542350, AY542349, AY542347, AY542336, AY542334, AY542332 Genomic DNA. Translation: AAT68174.1.
AY542324 mRNA. Translation: AAT68175.1.
AY542325 mRNA. Translation: AAT68176.1.
AY542326 mRNA. Translation: AAT68177.1.
AY542327 mRNA. Translation: AAT68178.1.
AK035159 mRNA. Translation: BAC28964.1.
AK137325 mRNA. Translation: BAE23307.1.
AK161955 mRNA. Translation: BAE36652.1.
CCDSiCCDS28159.2. [Q5DQR4-1]
CCDS49846.1. [Q5DQR4-4]
CCDS49847.1. [Q5DQR4-3]
CCDS49848.1. [Q5DQR4-2]
RefSeqiNP_001108083.1. NM_001114611.1. [Q5DQR4-4]
NP_001108084.1. NM_001114612.1. [Q5DQR4-3]
NP_001108085.1. NM_001114613.1. [Q5DQR4-2]
NP_766028.2. NM_172440.3. [Q5DQR4-1]
UniGeneiMm.403226.
Mm.80170.

Genome annotation databases

EnsembliENSMUST00000023526; ENSMUSP00000023526; ENSMUSG00000022829. [Q5DQR4-5]
ENSMUST00000114775; ENSMUSP00000110423; ENSMUSG00000022829. [Q5DQR4-6]
ENSMUST00000114780; ENSMUSP00000110428; ENSMUSG00000022829. [Q5DQR4-4]
ENSMUST00000114781; ENSMUSP00000110429; ENSMUSG00000022829. [Q5DQR4-2]
ENSMUST00000114782; ENSMUSP00000110430; ENSMUSG00000022829. [Q5DQR4-3]
ENSMUST00000114787; ENSMUSP00000110435; ENSMUSG00000022829. [Q5DQR4-1]
GeneIDi207227.
KEGGimmu:207227.
UCSCiuc007zds.2. mouse. [Q5DQR4-1]
uc007zdt.2. mouse. [Q5DQR4-2]
uc007zdu.2. mouse. [Q5DQR4-3]
uc007zdv.2. mouse. [Q5DQR4-4]
uc007zdw.2. mouse. [Q5DQR4-5]
uc007zdx.2. mouse. [Q5DQR4-6]
uc007zdy.2. mouse. [Q5DQR4-7]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY542354
, AY542328, AY542329, AY542331, AY542330, AY542332, AY542334, AY542336, AY542338, AY542340, AY542349, AY542348, AY542347, AY542346, AY542345, AY542344, AY542343, AY542342, AY542341, AY542353, AY542352, AY542351, AY542350, AY542339, AY542337, AY542335, AY542333 Genomic DNA. Translation: AAT68171.1.
AY542354
, AY542328, AY542329, AY542330, AY542332, AY542335, AY542334, AY542333, AY542331, AY542336, AY542345, AY542344, AY542343, AY542342, AY542341, AY542340, AY542339, AY542338, AY542337, AY542353, AY542352, AY542351, AY542350, AY542349, AY542347 Genomic DNA. Translation: AAT68172.1.
AY542354
, AY542328, AY542329, AY542331, AY542332, AY542330, AY542333, AY542335, AY542337, AY542340, AY542349, AY542348, AY542347, AY542345, AY542338, AY542344, AY542343, AY542342, AY542341, AY542353, AY542352, AY542351, AY542350, AY542339, AY542336, AY542334 Genomic DNA. Translation: AAT68173.1.
AY542354
, AY542329, AY542330, AY542328, AY542331, AY542333, AY542335, AY542337, AY542346, AY542345, AY542344, AY542343, AY542342, AY542341, AY542340, AY542339, AY542338, AY542353, AY542352, AY542351, AY542350, AY542349, AY542347, AY542336, AY542334, AY542332 Genomic DNA. Translation: AAT68174.1.
AY542324 mRNA. Translation: AAT68175.1.
AY542325 mRNA. Translation: AAT68176.1.
AY542326 mRNA. Translation: AAT68177.1.
AY542327 mRNA. Translation: AAT68178.1.
AK035159 mRNA. Translation: BAC28964.1.
AK137325 mRNA. Translation: BAE23307.1.
AK161955 mRNA. Translation: BAE36652.1.
CCDSiCCDS28159.2. [Q5DQR4-1]
CCDS49846.1. [Q5DQR4-4]
CCDS49847.1. [Q5DQR4-3]
CCDS49848.1. [Q5DQR4-2]
RefSeqiNP_001108083.1. NM_001114611.1. [Q5DQR4-4]
NP_001108084.1. NM_001114612.1. [Q5DQR4-3]
NP_001108085.1. NM_001114613.1. [Q5DQR4-2]
NP_766028.2. NM_172440.3. [Q5DQR4-1]
UniGeneiMm.403226.
Mm.80170.

3D structure databases

ProteinModelPortaliQ5DQR4.
SMRiQ5DQR4. Positions 515-544, 639-671, 1121-1177.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ5DQR4. 2 interactions.
STRINGi10090.ENSMUSP00000110435.

PTM databases

iPTMnetiQ5DQR4.
PhosphoSiteiQ5DQR4.

Proteomic databases

EPDiQ5DQR4.
MaxQBiQ5DQR4.
PaxDbiQ5DQR4.
PRIDEiQ5DQR4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000023526; ENSMUSP00000023526; ENSMUSG00000022829. [Q5DQR4-5]
ENSMUST00000114775; ENSMUSP00000110423; ENSMUSG00000022829. [Q5DQR4-6]
ENSMUST00000114780; ENSMUSP00000110428; ENSMUSG00000022829. [Q5DQR4-4]
ENSMUST00000114781; ENSMUSP00000110429; ENSMUSG00000022829. [Q5DQR4-2]
ENSMUST00000114782; ENSMUSP00000110430; ENSMUSG00000022829. [Q5DQR4-3]
ENSMUST00000114787; ENSMUSP00000110435; ENSMUSG00000022829. [Q5DQR4-1]
GeneIDi207227.
KEGGimmu:207227.
UCSCiuc007zds.2. mouse. [Q5DQR4-1]
uc007zdt.2. mouse. [Q5DQR4-2]
uc007zdu.2. mouse. [Q5DQR4-3]
uc007zdv.2. mouse. [Q5DQR4-4]
uc007zdw.2. mouse. [Q5DQR4-5]
uc007zdx.2. mouse. [Q5DQR4-6]
uc007zdy.2. mouse. [Q5DQR4-7]

Organism-specific databases

CTDi9515.
MGIiMGI:2443815. Stxbp5l.

Phylogenomic databases

eggNOGiENOG410INFH. Eukaryota.
ENOG410XTER. LUCA.
GeneTreeiENSGT00390000000018.
HOVERGENiHBG083064.
InParanoidiQ5DQR4.
KOiK08518.
OMAiMCDNLQE.
OrthoDBiEOG7DVD96.
PhylomeDBiQ5DQR4.
TreeFamiTF314585.

Miscellaneous databases

PROiQ5DQR4.
SOURCEiSearch...

Gene expression databases

BgeeiQ5DQR4.
CleanExiMM_STXBP5L.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR000664. Lethal2_giant.
IPR013905. Lgl_C_dom.
IPR013577. LLGL2.
IPR001388. Synaptobrevin.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08596. Lgl_C. 1 hit.
PF08366. LLGL. 1 hit.
PF00400. WD40. 1 hit.
[Graphical view]
PRINTSiPR00962. LETHAL2GIANT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 6 hits.
PROSITEiPS50892. V_SNARE. 1 hit.
PS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Two distinct genes drive expression of seven tomosyn isoforms in the mammalian brain, sharing a conserved structure with a unique variable domain."
    Groffen A.J.A., Jacobsen L., Schut D., Verhage M.
    J. Neurochem. 92:554-568(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1; 2; 3 AND 4), TISSUE SPECIFICITY.
    Strain: 129/Ola.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 5; 6 AND 7).
    Strain: C57BL/6J.
    Tissue: Cerebellum, Embryo and Olfactory bulb.
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-567; SER-573; SER-588; THR-595; SER-598; SER-792; SER-822 AND THR-1092, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brain and Kidney.

Entry informationi

Entry nameiSTB5L_MOUSE
AccessioniPrimary (citable) accession number: Q5DQR4
Secondary accession number(s): Q3TSM3
, Q3UVG2, Q5DQR1, Q5DQR2, Q5DQR3, Q8BS52
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: March 29, 2005
Last modified: June 8, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.