WD repeat domain 51B, like - Danio rerio (Zebrafish)

Contribute

Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q5CZV4 (Q5CZV4_DANRE)

Last modified November 3, 2009. Version 33. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
WD repeat domain 51B, like EMBL AAH90692.1

Gene names

Name:	wdr51bl EMBL AAH90692.1 ZFIN ZDB-GENE-050306-41
ORF Names:	zgc:113219 ZFIN ZDB-GENE-050306-41

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH90692.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	582 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q5CZV4-1 [UniParc].

Last modified March 29, 2005. Version 1.
Checksum: E3A78CF4F1A9190E
Show »

582

67,046

        10         20         30         40         50         60 
MKIRWSRKVA VLAKVCFLFS LLWLFCLLIV RSSPPSLADN DGRRDILARD LPPIEEEEED 

        70         80         90        100        110        120 
SENLLRPVYE KLPPDSNAPG EYGRATRLTL TSEEKKEEEA SVERCAINIF ISDKISLHRH 

       130        140        150        160        170        180 
IQDNRMHECK AKKYNIRRLP TTSVVIAFYN EAWSTLLRTI HSVLETTPAV LLKDIILVDD 

       190        200        210        220        230        240 
FSDRGYLKSQ LAQYISNLER VRLIRTKKRE GLVRARLIGA TYATGSVLTF LDCHCECVPG 

       250        260        270        280        290        300 
WIEPLLERIA ENETTIICPV IDTIDWNTFE FYMQTEEPMV GGFDWRLTFQ WHAVPEIDRK 

       310        320        330        340        350        360 
IRKSRIDPIR SPTMAGGLFA VSKAYFEYLG TYDMGMEVWG GENLELSFRV WQCGGSLEIH 

       370        380        390        400        410        420 
PCSHVGHVFP KKAPYARSNF LQNTVRAAEV WMDTYKQHFY NRNPPARKES YGDISERIVL 

       430        440        450        460        470        480 
RNRLQCKSFE WYLQNVYPGL HVPEDRPGWH GAVRSAGIHS ECLDYNAPDH NPTGAHLSLF 

       490        500        510        520        530        540 
GCHGQGGNQY FEYTSQREIR FNSVTELCAE VQDGMTHIGM KHCPQDGVPK PPSIIWQFRE 

       550        560        570        580 
DGSIFHPHSN MCITSYRTEE GRADIQMRSC STGDKHQRWS FE

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Singapore local strain EMBL AAH90692.1. Tissue: Embryo EMBL AAH90692.1.

Cross-references

Sequence databases
	BC090692 mRNA. Translation: AAH90692.1.
IPI	IPI00616361.
RefSeq	NP_001038243.2.
UniGene	Dr.74822
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Genome annotation databases
Ensembl	ENSDART00000023046; ENSDARP00000017934; ENSDARG00000012745; Danio rerio. [Genome view]
GeneID	503760.
KEGG	dre:503760.
Organism-specific databases
CTD	503760.
ZFIN	ZDB-GENE-050306-41. wdr51bl.
Phylogenomic databases
HOVERGEN	Q5CZV4.
Gene expression databases
Bgee	Q5CZV4.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5CZV4_DANRE

Accession

Primary (citable) accession number: Q5CZV4

Entry history

Integrated into UniProtKB/TrEMBL:	March 29, 2005
Last sequence update:	March 29, 2005
Last modified:	November 3, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information