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Protein
Submitted name:

MGC108053 protein

Gene

sar1b

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processER-Golgi transportUniRule annotation, Protein transportUniRule annotation, Transport
LigandGTP-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-XTR-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.
R-XTR-5694530. Cargo concentration in the ER.
R-XTR-8963888. Chylomicron assembly.
R-XTR-983170. Antigen Presentation: Folding, assembly and peptide loading of class I MHC.

Names & Taxonomyi

Protein namesi
Submitted name:
MGC108053 proteinImported
Submitted name:
Secretion-associated, Ras-related GTPase 1BImported
Gene namesi
Name:sar1bImported
Synonyms:MGC108053Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-944209. sar1b.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Golgi apparatusUniRule annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_501194687718 – 198Sequence analysisAdd BLAST181

Expressioni

Gene expression databases

BgeeiENSXETG00000010408.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000022861.

Family & Domainsi

Sequence similaritiesi

Belongs to the small GTPase superfamily. SAR1 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0077. Eukaryota.
ENOG410YIKI. LUCA.
GeneTreeiENSGT00550000074696.
HOGENOMiHOG000163690.
HOVERGENiHBG104997.
OrthoDBiEOG091G0KFV.
TreeFamiTF312890.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR006689. Small_GTPase_ARF/SAR.
IPR006687. Small_GTPase_SAR1.
PfamiView protein in Pfam
PF00025. Arf. 1 hit.
PRINTSiPR00328. SAR1GTPBP.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiView protein in PROSITE
PS51422. SAR1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5CZL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFLFSWISS GFSGVLQFLG LYKKTGKLVF LGLDNAGKTT LLQMLKDGRM
60 70 80 90 100
GQYVPTLHPT SEELTIAGMT FTTFDLGGHT QARRVWKNYL PAINGIVFLI
110 120 130 140 150
DCADHDRLSE SKRELDALMA DETIANVPIL LLGNKIDRPE AISEERLLHL
160 170 180 190
FGIYGQTTGK GKVPQKQLAN RPLEVFMCSI LKRQGYGEGF RWLSQYIY
Length:198
Mass (Da):22,268
Last modified:March 29, 2005 - v1
Checksum:iFCEC2873FF4ECB74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01051480 Genomic DNA. No translation available.
BC090805 mRNA. Translation: AAH90805.1.
RefSeqiNP_001015871.1. NM_001015871.1.
UniGeneiStr.66315.

Genome annotation databases

EnsembliENSXETT00000022861; ENSXETP00000022861; ENSXETG00000010408.
GeneIDi548588.

Similar proteinsi

Entry informationi

Entry nameiQ5CZL6_XENTR
AccessioniPrimary (citable) accession number: Q5CZL6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 29, 2005
Last sequence update: March 29, 2005
Last modified: January 31, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported