Q5CXX3 (Q5CXX3_CRYPI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
U6 snRNA-associated Sm-like protein LSm5. SM domain EMBL EAK90645.1

Gene names

ORF Names:

cgd7_4580 EMBL EAK90645.1

Organism

Cryptosporidium parvum (strain Iowa II) [Complete proteome]

Taxonomic identifier

353152 [NCBI]

Taxonomic lineage

Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Eimeriorina › Cryptosporidiidae › Cryptosporidium

Protein attributes

Sequence length	121 AA.
Sequence status	Fragment.
Protein existence	Evidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	3D-structure PDB 3PGG Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EAK90645.1

Sequences

	Sequence		Length	Mass (Da)
	Q5CXX3 [UniParc]. Last modified April 12, 2005. Version 1. Checksum: 16AC102938FD7DD9	FASTA	121	13,286
	10 20 30 40 50 60 SYKVNYMSET PANKSQGGSN QKGGNIILPL ALIDKCIGNR IYVVMKGDKE FSGVLRGFDE 70 80 90 100 110 120 YVNMVLDDVQ EYGFKADEED ISGGNKKLKR VMVNRLETIL LSGNNVAMLV PGGDPDSFNF S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the apicomplexan, Cryptosporidium parvum." Abrahamsen M.S., Templeton T.J., Enomoto S., Abrahante J.E., Zhu G., Lancto C.A., Deng M., Liu C., Widmer G., Tzipori S., Buck G.A., Xu P., Bankier A.T., Dear P.H., Konfortov B.A., Spriggs H.F., Iyer L., Anantharaman V., Aravind L., Kapur V. Science 304:441-445(2004) [PubMed: 15044751] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Iowa II.
[2]	"Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms." Vedadi M., Lew J., Artz J., Amani M., Zhao Y., Dong A., Wasney G.A., Gao M., Hills T., Brokx S., Qiu W., Sharma S., Diassiti A., Alam Z., Melone M., Mulichak A., Wernimont A., Bray J. , Loppnau P., Plotnikova O., Newberry K., Sundararajan E., Houston S., Walker J., Tempel W., Bochkarev A., Kozieradzki I., Edwards A., Arrowsmith C., Roos D., Kain K., Hui R. Mol. Biochem. Parasitol. 151:100-110(2007) [PubMed: 17125854] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.14 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AAEE01000001 Genomic DNA. Translation: EAK90645.1.

RefSeq

XP_628607.1. XM_628605.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3PGG	X-ray	2.14	A/B	1-121	[»]

ProteinModelPortal

Q5CXX3.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

3371948.

KEGG

cpv:cgd7_4580.

Organism-specific databases

EuPathDB

EupathDB:cgd7_4580.

Phylogenomic databases

HOGENOM

HBG749684.

ProtClustDB

CLSZ2431478.

Family and domain databases

InterPro

IPR010920. LSM-related_domain.
IPR001163. LSM_domain.
IPR006649. LSM_domain_euk/arc.
[Graphical view]

KO

K12624.

Pfam

PF01423. LSM. 1 hit.
[Graphical view]

SMART

SM00651. Sm. 1 hit.
[Graphical view]

SUPFAM

SSF50182. Sm_like_riboprot. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q5CXX3_CRYPI

Accession

Primary (citable) accession number: Q5CXX3

Entry history

Integrated into UniProtKB/TrEMBL:	April 12, 2005
Last sequence update:	April 12, 2005
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)