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Q5CU85 (Q5CU85_CRYPI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length825 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAK88972.1

Sequences

Sequence LengthMass (Da)Tools
Q5CU85 [UniParc].

Last modified April 12, 2005. Version 1.
Checksum: 1B9BD6A63ABAF8CA

FASTA82593,061
        10         20         30         40         50         60 
MTGKCLDSLF NEEDDMNEII ETEDSIIDSK ETIINEKISL DSILGRELMS NVKKDEKRSK 

        70         80         90        100        110        120 
KIKLDSNIQQ KLSFNFGTGN TPSSVNKSKP TKLEKVPENE ESGDSCTKNG SESLSKKIKP 

       130        140        150        160        170        180 
SNAGLFSPFS INITTGDEDI QSPMFDPCNI SKEKIMAKGK SNSILFSVLT DAFSRIEQLK 

       190        200        210        220        230        240 
GSGSGSKKGC IVILANLFRL IIHHNPSDLI DAVYICMNKV APDYEGKESG VGDSILIKCI 

       250        260        270        280        290        300 
SESSDKSEKR IKEDQISGKF EDLGEIAAIC KKQMRLLFEP QRLTIHDVYS DLYSLTEITG 

       310        320        330        340        350        360 
KQSQQLKKDK IKKLLVSGKQ DEVKYIVRFL QGRLRIGIQQ TTVYQALASA FVLTKNIPGD 

       370        380        390        400        410        420 
NLASFSDYRL AKNEKKYKNL QELDCEILEM ETSLRSSLCQ LPNIEKIINV AIQGASSDEI 

       430        440        450        460        470        480 
SAKCKLTTGI PCEPMLARPT KGIQDVLNRF ENFLFTAEYK YDGERAQIHV YKDKSNKRVI 

       490        500        510        520        530        540 
KIFTRNLESA TDRYPDLIQY LNQSLNSSVE DCILDSEVVA YSKSEDKILP FQVLSTRKRK 

       550        560        570        580        590        600 
NVAFDDIQIQ ICLMLFDCMG FNGESLLKKS LFERRQYLRK CINEGQSEYI KFTTSTETNK 

       610        620        630        640        650        660 
LDHLDSFLSE SIENNCEGLM VKTLHDNASY EPSKRSLNWL KIKKDYVDGL TDSIDVVPIA 

       670        680        690        700        710        720 
ACYGKGKRNG VFGTFLLAVY NTEEEVYETV CKAGTGFSDE ILQSLYTSLK DHIIAEGAPK 

       730        740        750        760        770        780 
SYYKFDSSGQ LSSLKQDVWF EPKFVWEVKG ADLSLSPVHT AAIGTIDENR GIGLRFPRFI 

       790        800        810        820 
RIRDDKSPEQ ATSSIQIMEM YNSQLITNNT KNETNFSDDQ FQEDD 

« Hide

References

[1]"Complete genome sequence of the apicomplexan, Cryptosporidium parvum."
Abrahamsen M.S., Templeton T.J., Enomoto S., Abrahante J.E., Zhu G., Lancto C.A., Deng M., Liu C., Widmer G., Tzipori S., Buck G.A., Xu P., Bankier A.T., Dear P.H., Konfortov B.A., Spriggs H.F., Iyer L., Anantharaman V., Aravind L., Kapur V.
Science 304:441-445(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Iowa II.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAEE01000004 Genomic DNA. Translation: EAK88972.1.
RefSeqXP_626929.1. XM_626929.1.

3D structure databases

ProteinModelPortalQ5CU85.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING5807.cgd3_3820.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3373851.
KEGGcpv:cgd3_3820.

Organism-specific databases

EuPathDBCryptoDB:cgd3_3820.

Phylogenomic databases

HOGENOMHOG000036006.
KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5CU85_CRYPI
AccessionPrimary (citable) accession number: Q5CU85
Entry history
Integrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)