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Protein
Submitted name:

RPD3/HD1 histone deacetylase

Gene

cgd6_80

Organism
Cryptosporidium parvum (strain Iowa II)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei111SubstrateUniRule annotation1
Active sitei153Proton acceptorUniRule annotation1
Binding sitei161Substrate; via carbonyl oxygenUniRule annotation1
Metal bindingi188Divalent metal cationUniRule annotation1
Metal bindingi190Divalent metal cationUniRule annotation1
Metal bindingi276Divalent metal cationUniRule annotation1
Binding sitei315SubstrateUniRule annotation1

GO - Molecular functioni

Keywordsi

LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RPD3/HD1 histone deacetylaseImported
Gene namesi
ORF Names:cgd6_80Imported
OrganismiCryptosporidium parvum (strain Iowa II)Imported
Taxonomic identifieri353152 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaConoidasidaCoccidiaEucoccidioridaEimeriorinaCryptosporidiidaeCryptosporidium
Proteomesi
  • UP000006726 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiCryptoDB:cgd6_80.

Interactioni

Protein-protein interaction databases

STRINGi353152.XP_625348.1.

Structurei

3D structure databases

ProteinModelPortaliQ5CPK1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 330Hist_deacetylInterPro annotationAdd BLAST293

Phylogenomic databases

eggNOGiKOG1342. Eukaryota.
COG0123. LUCA.
HOGENOMiHOG000225180.
InParanoidiQ5CPK1.
KOiK06067.
OMAiKRVCYFF.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiView protein in InterPro
IPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiView protein in Pfam
PF00850. Hist_deacetyl. 1 hit.
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Fragment.

Q5CPK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ILLVSHLNNI VVISLKMAKR VSYFYDGDIG SYYYGPGHPM KPQRIRMAHN
60 70 80 90 100
LILSYDLYKH MEIYKPHKSP QSELVYFHEE DYINFLSSIN PDNSKDFGLQ
110 120 130 140 150
LKRFNLGETT DCPVFDGLFE FQQICAGGSI DGAYKLNNEQ SDICINWSGG
160 170 180 190 200
LHHAKRSEAS GFCYINDIVL GILELLKYHA RVMYIDIDVH HGDGVEEAFY
210 220 230 240 250
LSHRVLTVSF HKFGEFFPGT GDITDIGVAQ GKYYSVNVPL NDGIDDDSFL
260 270 280 290 300
SLFKPIISKC IEVYRPGAIV LQCGADSVRG DRLGRFNLSI KGHAECVEFC
310 320 330 340 350
KKFNIPLLIL GGGGYTIRNV ARTWAYETAT ILDRTDLISD NIPLNDYYDY
360 370 380 390 400
FAPDFKLHIP PLNLPNMNSP EHLEKIKAKV IDNLRYLEHA PGVEFAYVPS
410 420 430 440 450
DFFDREASNL QKQEDEEREE ELSSWQGGGR AAGSTESQGN HNEKPKSSRK
460
LQKEHASEFY
Length:460
Mass (Da):52,200
Last modified:April 12, 2005 - v1
Checksum:i145845DA7A4A3051
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEE01000014 Genomic DNA. Translation: EAK87357.1.
RefSeqiXP_625348.1. XM_625348.1.

Genome annotation databases

EnsemblProtistsiEAK87357; EAK87357; cgd6_80.
GeneIDi3375652.
KEGGicpv:cgd6_80.

Similar proteinsi

Entry informationi

Entry nameiQ5CPK1_CRYPI
AccessioniPrimary (citable) accession number: Q5CPK1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: August 30, 2017
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported