Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q5CPK1

- Q5CPK1_CRYPI

UniProt

Q5CPK1 - Q5CPK1_CRYPI

Protein
Submitted name:

RPD3/HD1 histone deacetylase

Gene

cgd6_80

Organism
Cryptosporidium parvum (strain Iowa II)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (12 Apr 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. histone deacetylase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RPD3/HD1 histone deacetylaseImported
    Gene namesi
    ORF Names:cgd6_80Imported
    OrganismiCryptosporidium parvum (strain Iowa II)Imported
    Taxonomic identifieri353152 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataApicomplexaConoidasidaCoccidiaEucoccidioridaEimeriorinaCryptosporidiidaeCryptosporidium
    ProteomesiUP000006726: Chromosome 6

    Organism-specific databases

    EuPathDBiCryptoDB:cgd6_80.

    Interactioni

    Structurei

    3D structure databases

    ProteinModelPortaliQ5CPK1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000225180.
    KOiK06067.

    Family and domain databases

    Gene3Di3.40.800.20. 1 hit.
    InterProiIPR000286. His_deacetylse.
    IPR003084. His_deacetylse_1.
    IPR023801. His_deacetylse_dom.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF00850. Hist_deacetyl. 1 hit.
    [Graphical view]
    PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
    PRINTSiPR01270. HDASUPER.
    PR01271. HISDACETLASE.

    Sequencei

    Sequence statusi: Fragment.

    Q5CPK1-1 [UniParc]FASTAAdd to Basket

    « Hide

    ILLVSHLNNI VVISLKMAKR VSYFYDGDIG SYYYGPGHPM KPQRIRMAHN    50
    LILSYDLYKH MEIYKPHKSP QSELVYFHEE DYINFLSSIN PDNSKDFGLQ 100
    LKRFNLGETT DCPVFDGLFE FQQICAGGSI DGAYKLNNEQ SDICINWSGG 150
    LHHAKRSEAS GFCYINDIVL GILELLKYHA RVMYIDIDVH HGDGVEEAFY 200
    LSHRVLTVSF HKFGEFFPGT GDITDIGVAQ GKYYSVNVPL NDGIDDDSFL 250
    SLFKPIISKC IEVYRPGAIV LQCGADSVRG DRLGRFNLSI KGHAECVEFC 300
    KKFNIPLLIL GGGGYTIRNV ARTWAYETAT ILDRTDLISD NIPLNDYYDY 350
    FAPDFKLHIP PLNLPNMNSP EHLEKIKAKV IDNLRYLEHA PGVEFAYVPS 400
    DFFDREASNL QKQEDEEREE ELSSWQGGGR AAGSTESQGN HNEKPKSSRK 450
    LQKEHASEFY 460
    Length:460
    Mass (Da):52,200
    Last modified:April 12, 2005 - v1
    Checksum:i145845DA7A4A3051
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEE01000014 Genomic DNA. Translation: EAK87357.1.
    RefSeqiXP_625348.1. XM_625348.1.

    Genome annotation databases

    GeneIDi3375652.
    KEGGicpv:cgd6_80.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEE01000014 Genomic DNA. Translation: EAK87357.1 .
    RefSeqi XP_625348.1. XM_625348.1.

    3D structure databases

    ProteinModelPortali Q5CPK1.
    ModBasei Search...
    MobiDBi Search...

    Chemistry

    BindingDBi Q5CPK1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3375652.
    KEGGi cpv:cgd6_80.

    Organism-specific databases

    EuPathDBi CryptoDB:cgd6_80.

    Phylogenomic databases

    HOGENOMi HOG000225180.
    KOi K06067.

    Family and domain databases

    Gene3Di 3.40.800.20. 1 hit.
    InterProi IPR000286. His_deacetylse.
    IPR003084. His_deacetylse_1.
    IPR023801. His_deacetylse_dom.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF00850. Hist_deacetyl. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF037913. His_deacetylse_1. 1 hit.
    PRINTSi PR01270. HDASUPER.
    PR01271. HISDACETLASE.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Iowa IIImported.

    Entry informationi

    Entry nameiQ5CPK1_CRYPI
    AccessioniPrimary (citable) accession number: Q5CPK1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 12, 2005
    Last sequence update: April 12, 2005
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3