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Protein
Submitted name:

RPD3/HD1 histone deacetylase

Gene

cgd6_80

Organism
Cryptosporidium parvum (strain Iowa II)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RPD3/HD1 histone deacetylaseImported
Gene namesi
ORF Names:cgd6_80Imported
OrganismiCryptosporidium parvum (strain Iowa II)Imported
Taxonomic identifieri353152 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaConoidasidaCoccidiaEucoccidioridaEimeriorinaCryptosporidiidaeCryptosporidium
ProteomesiUP000006726 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiCryptoDB:cgd6_80.

Interactioni

Protein-protein interaction databases

STRINGi353152.XP_625348.1.

Structurei

3D structure databases

ProteinModelPortaliQ5CPK1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000225180.
InParanoidiQ5CPK1.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Fragment.

Q5CPK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ILLVSHLNNI VVISLKMAKR VSYFYDGDIG SYYYGPGHPM KPQRIRMAHN
60 70 80 90 100
LILSYDLYKH MEIYKPHKSP QSELVYFHEE DYINFLSSIN PDNSKDFGLQ
110 120 130 140 150
LKRFNLGETT DCPVFDGLFE FQQICAGGSI DGAYKLNNEQ SDICINWSGG
160 170 180 190 200
LHHAKRSEAS GFCYINDIVL GILELLKYHA RVMYIDIDVH HGDGVEEAFY
210 220 230 240 250
LSHRVLTVSF HKFGEFFPGT GDITDIGVAQ GKYYSVNVPL NDGIDDDSFL
260 270 280 290 300
SLFKPIISKC IEVYRPGAIV LQCGADSVRG DRLGRFNLSI KGHAECVEFC
310 320 330 340 350
KKFNIPLLIL GGGGYTIRNV ARTWAYETAT ILDRTDLISD NIPLNDYYDY
360 370 380 390 400
FAPDFKLHIP PLNLPNMNSP EHLEKIKAKV IDNLRYLEHA PGVEFAYVPS
410 420 430 440 450
DFFDREASNL QKQEDEEREE ELSSWQGGGR AAGSTESQGN HNEKPKSSRK
460
LQKEHASEFY
Length:460
Mass (Da):52,200
Last modified:April 12, 2005 - v1
Checksum:i145845DA7A4A3051
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEE01000014 Genomic DNA. Translation: EAK87357.1.
RefSeqiXP_625348.1. XM_625348.1.

Genome annotation databases

GeneIDi3375652.
KEGGicpv:cgd6_80.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEE01000014 Genomic DNA. Translation: EAK87357.1.
RefSeqiXP_625348.1. XM_625348.1.

3D structure databases

ProteinModelPortaliQ5CPK1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi353152.XP_625348.1.

Chemistry

BindingDBiQ5CPK1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3375652.
KEGGicpv:cgd6_80.

Organism-specific databases

EuPathDBiCryptoDB:cgd6_80.

Phylogenomic databases

HOGENOMiHOG000225180.
InParanoidiQ5CPK1.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Iowa IIImported.

Entry informationi

Entry nameiQ5CPK1_CRYPI
AccessioniPrimary (citable) accession number: Q5CPK1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: June 24, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.