Q5CP86 (Q5CP86_CRYHO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Histone H3 RuleBase RU004471

Gene names

ORF Names:

Chro.40366 EMBL EAL38415.1

Organism

Cryptosporidium hominis [Reference proteome] EMBL EAL38415.1

Taxonomic identifier

237895 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Apicomplexa › Conoidasida › Coccidia › Eucoccidiorida › Eimeriorina › Cryptosporidiidae › Cryptosporidium

Protein attributes

Sequence length	135 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA By similarity. RuleBase RU004471
Sequence similarities	Belongs to the histone H3 family. RuleBase RU004471
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAL38415.1

Ontologies

Keywords
Cellular component	Chromosome Nucleosome core RuleBase RU004471 Nucleus RuleBase RU004471 SAAS SAAS000164
Ligand	DNA-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nucleosome assembly Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleosome Inferred from electronic annotation. Source: UniProtKB-KW nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5CP86 [UniParc]. Last modified April 12, 2005. Version 1. Checksum: 01F7A5EFF9CD1376	FASTA	135	15,343
	10 20 30 40 50 60 MARTKQTARK STGGKAPRKQ LASKGARKSA PVTGGVKKPR RYRPGTVALR EIRRYQRSTE 70 80 90 100 110 120 LLIRKLPFQR LVREIAQDFK TDLRFQSSAV MALQEAAEAY LVGLFEDTNL CAIHAHRVTI 130 MPKDVQLARR IRGER

References

[1]

"The genome of Cryptosporidium hominis." Xu P., Widmer G., Wang Y., Ozaki L.S., Alves J.M., Serrano M.G., Puiu D., Manque P., Akiyoshi D., Mackey A.J., Pearson W.R., Dear P.H., Bankier A.T., Peterson D.L., Abrahamsen M.S., Kapur V., Tzipori S., Buck G.A. Nature 431:1107-1112(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TU502 EMBL EAL38415.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAEL01000002 Genomic DNA. Translation: EAL38415.1.
RefSeq	XP_668631.1. XM_663539.1.
3D structure databases
ProteinModelPortal	Q5CP86.
SMR	Q5CP86. Positions 2-135.
ModBase	Search...
Protein-protein interaction databases
STRING	237895.Q5CP86.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3413518.
KEGG	cho:Chro.40366.
Organism-specific databases
EuPathDB	CryptoDB:Chro.40366.
Phylogenomic databases
eggNOG	COG2036.
KO	K11253.
ProtClustDB	PTZ00018.
Family and domain databases
Gene3D	1.10.20.10. 1 hit.
InterPro	IPR009072. Histone-fold. IPR007125. Histone_core_D. IPR000164. Histone_H3. [Graphical view]
PANTHER	PTHR11426. PTHR11426. 1 hit.
Pfam	PF00125. Histone. 1 hit. [Graphical view]
PRINTS	PR00622. HISTONEH3.
SMART	SM00428. H3. 1 hit. [Graphical view]
SUPFAM	SSF47113. Histone-fold. 1 hit.
PROSITE	PS00322. HISTONE_H3_1. 1 hit. PS00959. HISTONE_H3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5CP86_CRYHO

Accession

Primary (citable) accession number: Q5CP86

Entry history

Integrated into UniProtKB/TrEMBL:	April 12, 2005
Last sequence update:	April 12, 2005
Last modified:	May 29, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)