Unreviewed, UniProtKB/TrEMBL Q5BN19 (Q5BN19_DROME)

Names and origin

Protein names

Submitted name:
    RNA-dependent DNA polymerase EMBL AAX28841.1

Gene names

Name:

ORF3 FlyBase FBgn0043847

Organism

Drosophila melanogaster (Fruit fly) EMBL AAX28841.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1000 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 reverse transcriptase domain. RuleBase RU000322V1

Ontologies

Gene Ontology (GO)
Biological process	DNA integration Inferred from electronic annotation. Source: InterPro RNA-dependent DNA replication Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro RNA binding Inferred from electronic annotation. Source: InterPro RNA-directed DNA polymerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5BN19-1 [UniParc]. Last modified April 12, 2005. Version 1. Checksum: 2C73094ACF808FC3	FASTA	1,000	116,112
	10 20 30 40 50 60 MDTLKYEPLS NYNVVQANSE HRNKTVLSQL KKNFPELFKS QLENICSEYI DIFALESEPI 70 80 90 100 110 120 TVNNLYKQQL RLKDDEPVYT KNYRSPHSQV EEIQAQVQKL IKDKIVEPSV SQYNSPLLLV 130 140 150 160 170 180 PKKSSPNSDK KKWRLVIDYR QINKKLLADK FPLPRIDDIL DQLGRAKYFS CLDLMSGFHQ 190 200 210 220 230 240 IELDEGSRDI TSFSTSNGSY RFTRLPFGLK IAPNSFQRMM TIAFSGIEPS QAFLYMDDLI 250 260 270 280 290 300 VIGCSEKHML KNLTEVFGKC REYNLKLHPE KCSFFMHEVT FLGHKCTDKG ILPDDKKYDV 310 320 330 340 350 360 IQNYPVPHDA DSARRFVAFC NYYRRFIKNF ADYSRHITRL CKKNVPFEWT DECQKAFIHL 370 380 390 400 410 420 KSQLINPTLL QYPDFSKEFC ITTDASKQAC GAVLTQNHNG HQLPVAYASR AFTKGESNKS 430 440 450 460 470 480 TTEQELAAIH WAIIHFRPYI YGKHFTVKTD HRPLTYLFSM VNPSSKLTRI RLELEEYNFT 490 500 510 520 530 540 VEYLKGKDNH VADALSRITI KELKDITGNI LKVTTRFQSR QKSCAGKEQL DLQKQTKEIA 550 560 570 580 590 600 SEPNVYEVIT NDEVRKVVTL QLNDSICLFK HGKKIIARYD VGDLYTNGIL DLDQFLQRLE 610 620 630 640 650 660 LQAGIYDISQ IKMAPWKKIF EHVSIDKFKN MGNKILKNLK VALLNPVTQI NNEKEKEAIL 670 680 690 700 710 720 STLHDDPIQG GHTGITKTLA KVKRHYYWKN MSKYIKEYVR KCQKCQKAKT TKHTKTPMTI 730 740 750 760 770 780 TETPEHAFDR VVVDTIGPLP KSENGNEYAV TLICDLTKYL VAIPIANKSA KTVAKAIFES 790 800 810 820 830 840 FILKYGPMKT FITDMGTEYK NSIITDLCKY LKIKNITSTA HHHQTVGVVE RSHRTLNEYI 850 860 870 880 890 900 RSYISTDKTD WDVWLQYFVY CFNTTQSMVH NYCPYELVFG RTSNLPKHFN KLHSIEPIYN 910 920 930 940 950 960 IDDYAKESKY RLEVAYARAR KLLEAHKEKN KENYDLKIKD IELEVGDKVL LRNEVGHKLD 970 980 990 1000 FKYTGPYKIE SIGDNNNITL LTNKNKKQIV HKDRLKKFHS

References

[1]	Celniker S.E., Kaminker J.S., Bergman C.M., Wan K., Rubin G.M. Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY928609 Genomic DNA. Translation: AAX28841.1.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	Q5BN19.
Organism-specific databases
FlyBase	FBgn0043847. 412\ORF3.
Family and domain databases
InterPro	IPR000477. DNA_pol_RVTase. IPR001584. Integrase_cat-core. IPR015416. Znf_H2C2_histone_UAS_bd. [Graphical view]
Pfam	PF00665. rve. 1 hit. PF00078. RVT_1. 1 hit. PF09337. zf-H2C2. 1 hit. [Graphical view]
PROSITE	PS50994. INTEGRASE. 1 hit. PS50878. RT_POL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5BN19_DROME

Accession

Primary (citable) accession number: Q5BN19

Entry history

Integrated into UniProtKB/TrEMBL:	April 12, 2005
Last sequence update:	April 12, 2005
Last modified:	January 20, 2009
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)