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Protein
Submitted name:

Matrin 3

Gene

Matr3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Matrin 3Imported
Gene namesi
Name:Matr3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1298379 Matr3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ5BL18

Expressioni

Gene expression databases

BgeeiENSMUSG00000037236
ExpressionAtlasiQ5BL18 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiQ5BL18, 2 interactors

Structurei

3D structure databases

SMRiQ5BL18
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini398 – 473RRMInterPro annotationAdd BLAST76
Domaini496 – 571RRMInterPro annotationAdd BLAST76
Domaini800 – 831Matrin-typeInterPro annotationAdd BLAST32

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili712 – 739Sequence analysisAdd BLAST28
Coiled coili826 – 846Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IGPC Eukaryota
ENOG410XSPB LUCA
HOVERGENiHBG057347
KOiK13213
OMAiLFYTNED
OrthoDBiEOG091G0QCV

Family and domain databases

CDDicd12714 RRM1_MATR3, 1 hit
cd12715 RRM2_MATR3, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR034928 MATR3_RRM1
IPR034930 MATR3_RRM2
IPR000690 Matrin/U1-C_Znf_C2H2
IPR003604 Matrin/U1-like-C_Znf_C2H2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SM00451 ZnF_U1, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
PS50171 ZF_MATRIN, 1 hit

Sequencei

Sequence statusi: Complete.

Q5BL18-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKSFQQSSL GRDSQGHGRD LSAAGIGLLA AATQSLSMPA SLGRMNQGTA
60 70 80 90 100
RLASLMNLGM SSSLNQQGAH SALSSASTSS HNLQSIFNIG SRGPLPLSSQ
110 120 130 140 150
HRGDTDQASN ILASFGLSAR DLDELSRYPE DKITPENLPQ ILLQLKRRRT
160 170 180 190 200
EEGPTLSYGR DGRSATREPP YRVPRDDWEE KRHFRRDSFD DRGPSLNPVL
210 220 230 240 250
DYDHGSRSQE SGYYDRMDYE DDRLRDGERC RDDSFFGETS HNYHKFDSEY
260 270 280 290 300
ERMGRGPGPL QERSLFEKKR GAPPSSNIED FHGLLPKGYP HLCSICDLPV
310 320 330 340 350
HSNKEWSQHI NGASHSRRCQ LLLEIYPEWN PDNDTGHTMG DPFMLQQSTN
360 370 380 390 400
PAPGILGPPP PSFHLGGPAV GPRGNLGAGN GNLQGPRHMQ KGRVETSRVV
410 420 430 440 450
HIMDFQRGKN LRYQLLQLVE PFGVISNHLI LNKINEAFIE MATTEDAQAA
460 470 480 490 500
VDYYTTTPAL VFGKPVRVHL SQKYKRIKKP EGKPDQKFDQ KQELGRVIHL
510 520 530 540 550
SNLPHSGYSD SAVLKLAEPY GKIKNYILMR MKSQAFIEME TREDAMAMVD
560 570 580 590 600
HCLKKALWFQ GRCVKVDLSE KYKKLVLRIP NRGIDLLKKD KSRKRSYSPD
610 620 630 640 650
GKESPSDKKS KTDAQKTESP AEGKEQEEKS GEDGEKDTKD DQTEQEPSML
660 670 680 690 700
LESEDELLVD EEEAAALLES GSSVGDETDL ANLGDVSSDG KKEPSDKAVK
710 720 730 740 750
KDPSASATSK KKLKKVDKIE ELDQENEAAL ENGIKNEENT EPGAESAENA
760 770 780 790 800
DDPNKDTSEN ADGQNDENKE DYTIPDEYRI GPYQPNVPVG IDYVIPKTGF
810 820 830 840
YCKLCSLFYT NEEVAKNTHC SSLPHYQKLK KFLNKLAEER RQKKET
Length:846
Mass (Da):94,630
Last modified:May 10, 2005 - v1
Checksum:i59C30E63D55093AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC090833 mRNA Translation: AAH90833.1
AK135937 mRNA Translation: BAE22731.1
RefSeqiNP_034901.2, NM_010771.6
UniGeneiMm.215034

Genome annotation databases

GeneIDi17184
KEGGimmu:17184

Similar proteinsi

Entry informationi

Entry nameiQ5BL18_MOUSE
AccessioniPrimary (citable) accession number: Q5BL18
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: May 23, 2018
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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