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Protein
Submitted name:

C9 protein

Gene

C9

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
C9 proteinImported
Gene namesi
Name:C9Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi620319. C9.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_500425359934 – 567Sequence analysisAdd BLAST534

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi118 ↔ 136PROSITE-ProRule annotation
Disulfide bondi130 ↔ 145PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

Proteomic databases

PaxDbiQ5BKC4.
PRIDEiQ5BKC4.

Structurei

3D structure databases

ProteinModelPortaliQ5BKC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 531MACPFInterPro annotationAdd BLAST383

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IH3C. Eukaryota.
ENOG410XT9A. LUCA.
HOGENOMiHOG000111869.
HOVERGENiHBG106792.
OrthoDBiEOG091G07LK.
PhylomeDBiQ5BKC4.
TreeFamiTF330498.

Family and domain databases

CDDicd00112. LDLa. 1 hit.
InterProiView protein in InterPro
IPR009030. Growth_fac_rcpt_cys_sf.
IPR036055. LDL_receptor-like_sf.
IPR023415. LDLR_class-A_CS.
IPR002172. LDrepeatLR_classA_rpt.
IPR001862. MAC_perforin.
IPR020864. MACPF.
IPR020863. MACPF_CS.
IPR000884. TSP1_rpt.
IPR036383. TSP1_rpt_sf.
PfamiView protein in Pfam
PF00057. Ldl_recept_a. 1 hit.
PF01823. MACPF. 1 hit.
PF00090. TSP_1. 1 hit.
PRINTSiPR00764. COMPLEMENTC9.
SMARTiView protein in SMART
SM00192. LDLa. 1 hit.
SM00457. MACPF. 1 hit.
SM00209. TSP1. 1 hit.
SUPFAMiSSF57184. SSF57184. 2 hits.
SSF57424. SSF57424. 1 hit.
SSF82895. SSF82895. 1 hit.
PROSITEiView protein in PROSITE
PS01209. LDLRA_1. 1 hit.
PS50068. LDLRA_2. 1 hit.
PS00279. MACPF_1. 1 hit.
PS51412. MACPF_2. 1 hit.
PS50092. TSP1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5BKC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLRTPGLPR RSGMASGVTI TLAIAIFALE INAQAPEPTP REEPSADALL
60 70 80 90 100
PIDCRMSTWS QWSQCDPCLK QRFRSRSIEV FGQFQGKSCA DALGDRQHCE
110 120 130 140 150
PTQECEEVQE NCGNDFQCET GRCIKRKLLC NGDNDCGDFS DESDCESDPR
160 170 180 190 200
LPCRDRVVEE SELGRTAGYG INILGMDPLG TPFDNEFYNG LCDRVRDGNT
210 220 230 240 250
LTYYRKPWNV AFLAYETKAD KNFRTENYEE QFEMFKTIVR DRTTSFNANL
260 270 280 290 300
ALKFTITEAP IKKVGVDEVS PEKNSSKPKD SSVDFQFSYF KKENFQRLSS
310 320 330 340 350
YLSQTKKMFL HVRGMIQLGR FVMRNRGVML TTTFLDDVKA LPVSYEKGEY
360 370 380 390 400
FGFLETYGTH YSSSGSLGGL YELIYVLDKA SMKEKGVELS DVKRCLGFNL
410 420 430 440 450
DVSLYTPLQT TLEGPSLTAN VNHSDCLKTG DGKVVNISRD HIIDDVISFI
460 470 480 490 500
RGGTRKQAVL LKEKLLRGAK TIDVNDFINW ASSLDDAPAL ISQKLSPIYN
510 520 530 540 550
LIPLTMKDAY AKKQNMEKAI EDYVNEFSAR KCYPCQNGGT AILLDGQCMC
560
SCTIKFKGIA CEISKQR
Length:567
Mass (Da):63,775
Last modified:April 12, 2005 - v1
Checksum:i7FA995A728065518
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC091127 mRNA. Translation: AAH91127.1.
UniGeneiRn.10252.

Similar proteinsi

Entry informationi

Entry nameiQ5BKC4_RAT
AccessioniPrimary (citable) accession number: Q5BKC4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: November 22, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation