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Q5BK38 (TM156_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified July 11, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transmembrane protein 156
Gene names
Name:Tmem156
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 286286Transmembrane protein 156
PRO_0000284506

Regions

Topological domain1 – 44Cytoplasmic Potential
Transmembrane5 – 2521Helical; Potential
Topological domain26 – 214189Extracellular Potential
Transmembrane215 – 23521Helical; Potential
Topological domain236 – 28651Cytoplasmic Potential

Amino acid modifications

Glycosylation451N-linked (GlcNAc...) Potential
Glycosylation541N-linked (GlcNAc...) Potential
Glycosylation761N-linked (GlcNAc...) Potential
Glycosylation1421N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q5BK38 [UniParc].

Last modified April 12, 2005. Version 1.
Checksum: 57AB8B4FC976EE7F

FASTA28632,552
        10         20         30         40         50         60 
MTETAFLKLF VAIVITFILV LPEFFKTPKE RTLELSCLEV CFLPNSTYPL SSFNFSSVAF 

        70         80         90        100        110        120 
LQPAEETQTI MGILPNHSSF QSFAEICQGI TSGLPMCSLC LVCESKGDVD FTSQEQTSKG 

       130        140        150        160        170        180 
LVMRGSKEVK ASDFYSPCEY FNVTVALLAD PVKEDTTCTP EGHPGEAIAL DEDPVREKSL 

       190        200        210        220        230        240 
NHTCRFMKNT DNCTHIFLHL EMDVKSVTCS MKITWYVLVL FVFMLGIIFI IYKILEEHRR 

       250        260        270        280 
VWRRQSHNYK SSSVLFRGHD SGKLSTLNVR VIPGYPWTIW TRDFDE

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Thymus.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC091217 mRNA. Translation: AAH91217.1.
IPIIPI00388093.
RefSeqNP_001020309.1. NM_001025138.1.
UniGeneRn.41435.

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ5BK38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000032273; ENSRNOP00000032292; ENSRNOG00000026518.
GeneID498365.
KEGGrno:498365.
UCSCRGD:1562424. rat.

Organism-specific databases

CTD80008.
RGD1562424. Tmem156.

Phylogenomic databases

eggNOGNOG28044.
GeneTreeENSGT00390000017929.
HOGENOMHOG000154613.
HOVERGENHBG098801.
InParanoidQ5BK38.
OMAQEQTSKV.
OrthoDBEOG48SGTW.

Gene expression databases

GenevestigatorQ5BK38.

Family and domain databases

ProtoNetSearch...

Other

NextBio699561.

Entry information

Entry nameTM156_RAT
AccessionPrimary (citable) accession number: Q5BK38
Entry history
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: April 12, 2005
Last modified: July 11, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
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