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Protein

Protein FAM110B

Gene

Fam110b

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM110B
Gene namesi
Name:Fam110b
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1563403. Fam110b.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002856541 – 366Protein FAM110BAdd BLAST366

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei234PhosphoserineBy similarity1
Modified residuei297PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ5BJX5.
PRIDEiQ5BJX5.

PTM databases

iPTMnetiQ5BJX5.
PhosphoSitePlusiQ5BJX5.

Expressioni

Gene expression databases

BgeeiENSRNOG00000009114.
GenevisibleiQ5BJX5. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012067.

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM110 family.Curated

Phylogenomic databases

eggNOGiENOG410IF7K. Eukaryota.
ENOG410ZHRK. LUCA.
GeneTreeiENSGT00530000063395.
HOGENOMiHOG000112424.
HOVERGENiHBG051171.
InParanoidiQ5BJX5.
OMAiWPPHRPD.
OrthoDBiEOG091G0LV4.
PhylomeDBiQ5BJX5.
TreeFamiTF330964.

Family and domain databases

InterProiIPR025740. FAM110.
IPR025741. FAM110_C.
IPR025739. FAM110_N.
[Graphical view]
PANTHERiPTHR14758. PTHR14758. 1 hit.
PfamiPF14160. FAM110_C. 1 hit.
PF14161. FAM110_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5BJX5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTETLQTGS MVKPVSPAGT FTSAVPLRIL NKGPDYFRRQ AEPNPKRLSA
60 70 80 90 100
VERLEADKAK YVKSQEVINA KQEPVKPAVL AKPPVCPGAK RVLGSPTLKV
110 120 130 140 150
FGNHAKTESG VQRETLKLEI LKNIINSSEG SSSGSGHKHS SRNWPPHRDT
160 170 180 190 200
TELHRHSFAE SLKVYPTPGR GSPQESSSHV SRRLLEQSAE SFLHVSHSSS
210 220 230 240 250
DIRKVTSVKP LKAIPCSSSA PPLPPKPKVA AMKSPDADQV EPACGVSRRP
260 270 280 290 300
SLQRSKSDLS DRYFRVDADV ERFFNYCGLD PEELENLGME NFARANSDII
310 320 330 340 350
SLNFRSASMI SSDCEQSQDS NSDLRNDDSA NDRVPYGISA IERNARIIKW
360
LYSIKQARES QKVSHV
Length:366
Mass (Da):40,363
Last modified:April 12, 2005 - v1
Checksum:i31CFC00683236BC1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC091289 mRNA. Translation: AAH91289.1.
RefSeqiNP_001019512.1. NM_001024341.1.
XP_006237901.1. XM_006237839.3.
XP_006237902.1. XM_006237840.3.
XP_006237903.1. XM_006237841.3.
XP_006237905.1. XM_006237843.3.
XP_008761774.1. XM_008763552.2.
XP_008761775.1. XM_008763553.2.
XP_008761777.1. XM_008763555.2.
XP_017449056.1. XM_017593567.1.
XP_017449057.1. XM_017593568.1.
UniGeneiRn.20088.

Genome annotation databases

EnsembliENSRNOT00000012066; ENSRNOP00000012067; ENSRNOG00000009114.
GeneIDi500400.
KEGGirno:500400.
UCSCiRGD:1563403. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC091289 mRNA. Translation: AAH91289.1.
RefSeqiNP_001019512.1. NM_001024341.1.
XP_006237901.1. XM_006237839.3.
XP_006237902.1. XM_006237840.3.
XP_006237903.1. XM_006237841.3.
XP_006237905.1. XM_006237843.3.
XP_008761774.1. XM_008763552.2.
XP_008761775.1. XM_008763553.2.
XP_008761777.1. XM_008763555.2.
XP_017449056.1. XM_017593567.1.
XP_017449057.1. XM_017593568.1.
UniGeneiRn.20088.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012067.

PTM databases

iPTMnetiQ5BJX5.
PhosphoSitePlusiQ5BJX5.

Proteomic databases

PaxDbiQ5BJX5.
PRIDEiQ5BJX5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000012066; ENSRNOP00000012067; ENSRNOG00000009114.
GeneIDi500400.
KEGGirno:500400.
UCSCiRGD:1563403. rat.

Organism-specific databases

CTDi90362.
RGDi1563403. Fam110b.

Phylogenomic databases

eggNOGiENOG410IF7K. Eukaryota.
ENOG410ZHRK. LUCA.
GeneTreeiENSGT00530000063395.
HOGENOMiHOG000112424.
HOVERGENiHBG051171.
InParanoidiQ5BJX5.
OMAiWPPHRPD.
OrthoDBiEOG091G0LV4.
PhylomeDBiQ5BJX5.
TreeFamiTF330964.

Miscellaneous databases

PROiQ5BJX5.

Gene expression databases

BgeeiENSRNOG00000009114.
GenevisibleiQ5BJX5. RN.

Family and domain databases

InterProiIPR025740. FAM110.
IPR025741. FAM110_C.
IPR025739. FAM110_N.
[Graphical view]
PANTHERiPTHR14758. PTHR14758. 1 hit.
PfamiPF14160. FAM110_C. 1 hit.
PF14161. FAM110_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF110B_RAT
AccessioniPrimary (citable) accession number: Q5BJX5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: April 12, 2005
Last modified: November 30, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.