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Q5BJS8

- Q5BJS8_RAT

UniProt

Q5BJS8 - Q5BJS8_RAT

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Protein
Submitted name: Itpr1 protein
Gene
Itpr1
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. intracellular ligand-gated calcium channel activity Source: Ensembl
  2. phosphatidylinositol binding Source: Ensembl

GO - Biological processi

  1. endoplasmic reticulum calcium ion homeostasis Source: Ensembl
  2. intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress Source: Ensembl
  3. post-embryonic development Source: Ensembl
  4. release of sequestered calcium ion into cytosol Source: Ensembl
  5. response to hypoxia Source: Ensembl
  6. voluntary musculoskeletal movement Source: Ensembl
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_211910. Antigen activates B Cell Receptor (BCR) leading to generation of second messengers.

Names & Taxonomyi

Protein namesi
Submitted name:
Itpr1 proteinImported
Gene namesi
Name:Itpr1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi2933. Itpr1.

Subcellular locationi

GO - Cellular componenti

  1. calcineurin complex Source: Ensembl
  2. endoplasmic reticulum membrane Source: Ensembl
  3. nuclear inner membrane Source: Ensembl
  4. nucleolus Source: Ensembl
  5. platelet dense granule membrane Source: Ensembl
  6. platelet dense tubular network Source: Ensembl
  7. postsynaptic density Source: Ensembl
  8. sarcoplasmic reticulum Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ5BJS8.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000007660.
InParanoidiQ5BJS8.
KOiK04958.

Family and domain databases

InterProiIPR015925. Ryanodine_recept-rel.
[Graphical view]
PANTHERiPTHR13715. PTHR13715. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q5BJS8-1 [UniParc]FASTAAdd to Basket

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FEEHIKEEHN MWHYLCFIVL VKVKDSTEYT GPESYVAEMI RERNLDWFPR    50
MRAMSLVSSD SEGEQNELRN LQEKLESTMK LVTNLSGQLS ELKDQMTEQR 100
KQKQRIGLLG HPPHMNVNPQ QPA 123
Length:123
Mass (Da):14,484
Last modified:April 12, 2005 - v1
Checksum:i50C33E512B23DC62
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091346 mRNA. Translation: AAH91346.1.
RefSeqiNP_001007236.2. NM_001007235.2.
NP_001257525.1. NM_001270596.1.
NP_001257526.1. NM_001270597.1.
UniGeneiRn.2135.

Genome annotation databases

GeneIDi25262.
KEGGirno:25262.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091346 mRNA. Translation: AAH91346.1 .
RefSeqi NP_001007236.2. NM_001007235.2.
NP_001257525.1. NM_001270596.1.
NP_001257526.1. NM_001270597.1.
UniGenei Rn.2135.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 25262.
KEGGi rno:25262.

Organism-specific databases

CTDi 3708.
RGDi 2933. Itpr1.

Phylogenomic databases

HOGENOMi HOG000007660.
InParanoidi Q5BJS8.
KOi K04958.

Enzyme and pathway databases

Reactomei REACT_211910. Antigen activates B Cell Receptor (BCR) leading to generation of second messengers.

Gene expression databases

Genevestigatori Q5BJS8.

Family and domain databases

InterProi IPR015925. Ryanodine_recept-rel.
[Graphical view ]
PANTHERi PTHR13715. PTHR13715. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ5BJS8_RAT
AccessioniPrimary (citable) accession number: Q5BJS8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: September 3, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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