Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q5BJM6

- Q5BJM6_RAT

UniProt

Q5BJM6 - Q5BJM6_RAT

Protein
Submitted name:

Afg3l2 protein

Gene

Afg3l2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. metalloendopeptidase activity Source: InterPro

    GO - Biological processi

    1. axonogenesis Source: Ensembl
    2. cristae formation Source: Ensembl
    3. death Source: Ensembl
    4. mitochondrial fusion Source: Ensembl
    5. mitochondrial protein processing Source: Ensembl
    6. muscle fiber development Source: Ensembl
    7. myelination Source: Ensembl
    8. nerve development Source: Ensembl
    9. neuromuscular junction development Source: Ensembl
    10. regulation of multicellular organism growth Source: Ensembl
    11. righting reflex Source: Ensembl

    Protein family/group databases

    MEROPSiM41.007.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Afg3l2 proteinImported
    Gene namesi
    Name:Afg3l2Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi1305259. Afg3l2.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial inner membrane Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PaxDbiQ5BJM6.
    PRIDEiQ5BJM6.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5BJM6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000024632.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5BJM6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0465.
    HOGENOMiHOG000217277.
    HOVERGENiHBG054965.
    InParanoidiQ5BJM6.
    PhylomeDBiQ5BJM6.

    Family and domain databases

    InterProiIPR000642. Peptidase_M41.
    [Graphical view]
    PfamiPF01434. Peptidase_M41. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5BJM6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MCMTLGGRVS EEIFFGRITT GAQDDLRKVT QSAYAQIVQF GMNEKVGQIS    50
    FDLPRQGDMV LEKPYSEATA RMIDDEVRIL ISEAYKRTVA LLTEKKADVE 100
    KVALLLLEKE VLDKNDMVEL LGPRPFTEKS TYEEFVEGTG SLDEDTSLPE 150
    GLQDWNKERE KEKKEKKEKE EPVNEKVVS 179
    Length:179
    Mass (Da):20,383
    Last modified:April 12, 2005 - v1
    Checksum:i7FCCC8EC49ADA14F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC091419 mRNA. Translation: AAH91419.1.
    UniGeneiRn.8386.

    Genome annotation databases

    UCSCiRGD:1305259. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC091419 mRNA. Translation: AAH91419.1 .
    UniGenei Rn.8386.

    3D structure databases

    ProteinModelPortali Q5BJM6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000024632.

    Protein family/group databases

    MEROPSi M41.007.

    Proteomic databases

    PaxDbi Q5BJM6.
    PRIDEi Q5BJM6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi RGD:1305259. rat.

    Organism-specific databases

    RGDi 1305259. Afg3l2.

    Phylogenomic databases

    eggNOGi COG0465.
    HOGENOMi HOG000217277.
    HOVERGENi HBG054965.
    InParanoidi Q5BJM6.
    PhylomeDBi Q5BJM6.

    Gene expression databases

    Genevestigatori Q5BJM6.

    Family and domain databases

    InterProi IPR000642. Peptidase_M41.
    [Graphical view ]
    Pfami PF01434. Peptidase_M41. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: SpleenImported.

    Entry informationi

    Entry nameiQ5BJM6_RAT
    AccessioniPrimary (citable) accession number: Q5BJM6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 12, 2005
    Last sequence update: April 12, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)