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Q5BJM6

- Q5BJM6_RAT

UniProt

Q5BJM6 - Q5BJM6_RAT

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Protein
Submitted name: Afg3l2 protein
Gene
Afg3l2
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. metalloendopeptidase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. axonogenesis Source: Ensembl
  2. cristae formation Source: Ensembl
  3. death Source: Ensembl
  4. mitochondrial fusion Source: Ensembl
  5. mitochondrial protein processing Source: Ensembl
  6. muscle fiber development Source: Ensembl
  7. myelination Source: Ensembl
  8. nerve development Source: Ensembl
  9. neuromuscular junction development Source: Ensembl
  10. regulation of multicellular organism growth Source: Ensembl
  11. righting reflex Source: Ensembl
Complete GO annotation...

Protein family/group databases

MEROPSiM41.007.

Names & Taxonomyi

Protein namesi
Submitted name:
Afg3l2 proteinImported
Gene namesi
Name:Afg3l2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1305259. Afg3l2.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrial inner membrane Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ5BJM6.
PRIDEiQ5BJM6.

Expressioni

Gene expression databases

GenevestigatoriQ5BJM6.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024632.

Structurei

3D structure databases

ProteinModelPortaliQ5BJM6.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0465.
HOGENOMiHOG000217277.
HOVERGENiHBG054965.
InParanoidiQ5BJM6.
PhylomeDBiQ5BJM6.

Family and domain databases

InterProiIPR000642. Peptidase_M41.
[Graphical view]
PfamiPF01434. Peptidase_M41. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5BJM6-1 [UniParc]FASTAAdd to Basket

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MCMTLGGRVS EEIFFGRITT GAQDDLRKVT QSAYAQIVQF GMNEKVGQIS    50
FDLPRQGDMV LEKPYSEATA RMIDDEVRIL ISEAYKRTVA LLTEKKADVE 100
KVALLLLEKE VLDKNDMVEL LGPRPFTEKS TYEEFVEGTG SLDEDTSLPE 150
GLQDWNKERE KEKKEKKEKE EPVNEKVVS 179
Length:179
Mass (Da):20,383
Last modified:April 12, 2005 - v1
Checksum:i7FCCC8EC49ADA14F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091419 mRNA. Translation: AAH91419.1.
UniGeneiRn.8386.

Genome annotation databases

UCSCiRGD:1305259. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091419 mRNA. Translation: AAH91419.1 .
UniGenei Rn.8386.

3D structure databases

ProteinModelPortali Q5BJM6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000024632.

Protein family/group databases

MEROPSi M41.007.

Proteomic databases

PaxDbi Q5BJM6.
PRIDEi Q5BJM6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:1305259. rat.

Organism-specific databases

RGDi 1305259. Afg3l2.

Phylogenomic databases

eggNOGi COG0465.
HOGENOMi HOG000217277.
HOVERGENi HBG054965.
InParanoidi Q5BJM6.
PhylomeDBi Q5BJM6.

Gene expression databases

Genevestigatori Q5BJM6.

Family and domain databases

InterProi IPR000642. Peptidase_M41.
[Graphical view ]
Pfami PF01434. Peptidase_M41. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: SpleenImported.

Entry informationi

Entry nameiQ5BJM6_RAT
AccessioniPrimary (citable) accession number: Q5BJM6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: July 9, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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