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Protein

Protein strawberry notch homolog 1

Gene

Sbno1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein strawberry notch homolog 1
Gene namesi
Name:Sbno1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1310005. Sbno1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12691269Protein strawberry notch homolog 1PRO_0000314557Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei113 – 1131N6-acetyllysineBy similarity
Modified residuei126 – 1261PhosphoserineBy similarity
Modified residuei178 – 1781PhosphoserineCombined sources
Modified residuei377 – 3771N6-acetyllysineBy similarity
Modified residuei656 – 6561PhosphoserineBy similarity
Modified residuei657 – 6571PhosphoserineBy similarity
Modified residuei661 – 6611PhosphoserineBy similarity
Modified residuei700 – 7001PhosphoserineCombined sources
Modified residuei701 – 7011PhosphoserineCombined sources
Modified residuei1098 – 10981N6-acetyllysineBy similarity
Modified residuei1262 – 12621PhosphoserineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ5BJL5.
PRIDEiQ5BJL5.

PTM databases

iPTMnetiQ5BJL5.
PhosphoSiteiQ5BJL5.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000054711.

Structurei

3D structure databases

ProteinModelPortaliQ5BJL5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili719 – 74628Sequence analysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi42 – 454Poly-Gln
Compositional biasi703 – 7064Poly-Asp

Sequence similaritiesi

Belongs to the SBNO family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG1513. Eukaryota.
ENOG410XQ7Q. LUCA.
HOGENOMiHOG000043949.
HOVERGENiHBG108461.
InParanoidiQ5BJL5.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR026937. SBNO_Helicase_C_dom.
IPR026741. SNO.
[Graphical view]
PANTHERiPTHR12706. PTHR12706. 2 hits.
PfamiPF13871. Helicase_C_4. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

Q5BJL5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEPGQDLLL AALSESGISP NDLFDVDGGD AGLATPTPPS VQQQQPPSTT
60 70 80 90 100
TFVLNQINQL PTLGSTIVMT KTPPATTNRQ TITLTKFIQT TANTRPSVSA
110 120 130 140 150
PAVRNAIPPA PAKDQVQLKD LLKNNSLNEL MKLKPPANIA QPVATAAADV
160 170 180 190 200
SNGAVKKESS NKEVARVWIN DMKMRSFSPT MKVPVVREED EPEEEDEEEM
210 220 230 240 250
GHAETYAEYM PIKLKIGLRH PDAVVETSSL SSVTPPDVWY KTSISEETID
260 270 280 290 300
NGWLSALQLE AVTYAAQQHE TFLPNGDRAG FLIGDGAGVG KGRTIAGIIY
310 320 330 340 350
ENYLLSRKRA LWFSVSNDLK YDAERDLRDI GAKNILVHSL NKFKYGKISS
360 370 380 390 400
KHNGSVKKGV IFATYSSLIG ESQSGGKYKT RLKQLLHWCG DDFDGVIVFD
410 420 430 440 450
ECHKAKNLCP VGSSKPTKTG LAVLELQNKL PKARVVYASA TGASEPRNMA
460 470 480 490 500
YMNRLGIWGE GTPFREFSDF IQAVERRGVG AMEIVAMDMK LRGMYIARQL
510 520 530 540 550
SFTGVTFKIE EVLLSQSYVK MYNKAVKLWV IARERFQQAA DLIDAEQRMK
560 570 580 590 600
KSMWGQFWSA HQRFFKYLCI ASKVKRVVQL AREEIKNGKC VVIGLQSTGE
610 620 630 640 650
ARTLEALEEG GGELNDFVST AKGVLQSLIE KHFPAPDRKK LYSLLGIDLT
660 670 680 690 700
APSNNSSPRD SAKKARKIGG LTGSSSDDSG SESDVSDNEE SDYESSKNMS
710 720 730 740 750
SGDDDDFNPF RDDNSSLITS QDAVERAQQM KKDLLDKLEK LAEDLPPNTL
760 770 780 790 800
DELIDELGGP ENVAEMTGRK GRVVSNDDGS ISYESRSELD VPVEILNITE
810 820 830 840 850
KQRFMDGDKN IAIISEAASS GISLQADRRA KNQRRRVHMT LELPWSADRA
860 870 880 890 900
IQQFGRTHRS NQVTAPEYVF LISELAGEQR FASIVAKRLE SLGALTHGDR
910 920 930 940 950
RATESRDLSR FNFDNKYGRN ALEIVMKSIV NLDSPMVSPP PDYPGEFFKD
960 970 980 990 1000
VRQGLIGVGL INVEDRSGIL TLDKDYNNIG KFLNRILGME VHQQNALFQY
1010 1020 1030 1040 1050
FADTLTAVVQ NAKKNGRYDM GILDLGSGDE KVRKSDVKKF LTPGYSTSGH
1060 1070 1080 1090 1100
VELYTISVER GMSWDEATKI WAELTGPDDG FYLSLQIRNN KKTAILVKEV
1110 1120 1130 1140 1150
NPKKKLFLIY RPNTGKQLKL EIYADLKKKY KKVVSDDALV HWLDQYNSSA
1160 1170 1180 1190 1200
DTCTHAYWRG NCKKASLGLV CEIGLRCRTY YVLCGSVLSV WTKVEGVLAS
1210 1220 1230 1240 1250
VSGTNVKMQI VRLRTEDGQR IVGLIIPANC VSPLVNLLST SDQSQQLAVQ
1260
QKQLWQQHHP QSITNLSNV
Length:1,269
Mass (Da):140,741
Last modified:January 15, 2008 - v2
Checksum:iFEDD26493007AE08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03082113 Genomic DNA. No translation available.
BC091433 mRNA. Translation: AAH91433.1.
UniGeneiRn.12294.

Genome annotation databases

UCSCiRGD:1310005. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03082113 Genomic DNA. No translation available.
BC091433 mRNA. Translation: AAH91433.1.
UniGeneiRn.12294.

3D structure databases

ProteinModelPortaliQ5BJL5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000054711.

PTM databases

iPTMnetiQ5BJL5.
PhosphoSiteiQ5BJL5.

Proteomic databases

PaxDbiQ5BJL5.
PRIDEiQ5BJL5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiRGD:1310005. rat.

Organism-specific databases

RGDi1310005. Sbno1.

Phylogenomic databases

eggNOGiKOG1513. Eukaryota.
ENOG410XQ7Q. LUCA.
HOGENOMiHOG000043949.
HOVERGENiHBG108461.
InParanoidiQ5BJL5.

Miscellaneous databases

PROiQ5BJL5.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR026937. SBNO_Helicase_C_dom.
IPR026741. SNO.
[Graphical view]
PANTHERiPTHR12706. PTHR12706. 2 hits.
PfamiPF13871. Helicase_C_4. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiSBNO1_RAT
AccessioniPrimary (citable) accession number: Q5BJL5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 15, 2008
Last modified: July 6, 2016
This is version 61 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.