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Q5BJI6

- POP5_DANRE

UniProt

Q5BJI6 - POP5_DANRE

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Protein

Ribonuclease P/MRP protein subunit POP5

Gene

pop5

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP (By similarity).By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-EC

GO - Biological processi

  1. tRNA processing Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P/MRP protein subunit POP5 (EC:3.1.26.5)
Gene namesi
Name:pop5
ORF Names:zgc:110616
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 8

Organism-specific databases

ZFINiZDB-GENE-050320-123. pop5.

Subcellular locationi

Nucleusnucleolus By similarity

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 169169Ribonuclease P/MRP protein subunit POP5PRO_0000239009Add
BLAST

Expressioni

Gene expression databases

BgeeiQ5BJI6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiNOG284693.
GeneTreeiENSGT00390000012331.
HOGENOMiHOG000293345.
HOVERGENiHBG082157.
InParanoidiQ5BJI6.
KOiK03537.
OMAiCEVVSDD.
OrthoDBiEOG7GTT69.
PhylomeDBiQ5BJI6.
TreeFamiTF317496.

Family and domain databases

InterProiIPR016819. RNase_P/MRP_POP5.
IPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFiPIRSF023803. Ribonuclease_P_prd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5BJI6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVRFKSRYLL CELCVSEPSS LHLFEDKVVY QALRGAVNRA HGDYGAAIFN
60 70 80 90 100
ITLGVLVKYL NAHTGVVLIR CRKAHYRLVW SSLPFITFLE NRGQKVRCFF
110 120 130 140 150
NCIHVGGTIR TSQKFLIKYN RQQLQRMLLD CKTDAEKQDV RKAILSCSLN
160
LIKGEETDGS DDDGDEEDT
Length:169
Mass (Da):19,306
Last modified:April 12, 2005 - v1
Checksum:iE0C78539E13B9880
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091467 mRNA. Translation: AAH91467.1.
RefSeqiNP_001013566.1. NM_001013548.1.
UniGeneiDr.39115.

Genome annotation databases

EnsembliENSDART00000075491; ENSDARP00000069973; ENSDARG00000053452.
GeneIDi541421.
KEGGidre:541421.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC091467 mRNA. Translation: AAH91467.1 .
RefSeqi NP_001013566.1. NM_001013548.1.
UniGenei Dr.39115.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000075491 ; ENSDARP00000069973 ; ENSDARG00000053452 .
GeneIDi 541421.
KEGGi dre:541421.

Organism-specific databases

CTDi 51367.
ZFINi ZDB-GENE-050320-123. pop5.

Phylogenomic databases

eggNOGi NOG284693.
GeneTreei ENSGT00390000012331.
HOGENOMi HOG000293345.
HOVERGENi HBG082157.
InParanoidi Q5BJI6.
KOi K03537.
OMAi CEVVSDD.
OrthoDBi EOG7GTT69.
PhylomeDBi Q5BJI6.
TreeFami TF317496.

Miscellaneous databases

NextBioi 20879231.
PROi Q5BJI6.

Gene expression databases

Bgeei Q5BJI6.

Family and domain databases

InterProi IPR016819. RNase_P/MRP_POP5.
IPR002759. RNase_P/MRP_subunit.
[Graphical view ]
Pfami PF01900. RNase_P_Rpp14. 1 hit.
[Graphical view ]
PIRSFi PIRSF023803. Ribonuclease_P_prd. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Embryo.

Entry informationi

Entry nameiPOP5_DANRE
AccessioniPrimary (citable) accession number: Q5BJI6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: April 12, 2005
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3