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Q5BJI6 (POP5_DANRE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease P/MRP protein subunit POP5

EC=3.1.26.5
Gene names
Name:pop5
ORF Names:zgc:110616
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length169 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP By similarity.

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

Subcellular location

Nucleusnucleolus By similarity.

Sequence similarities

Belongs to the eukaryotic/archaeal RNase P protein component 2 family.

Ontologies

Keywords
   Biological processtRNA processing
   Cellular componentNucleus
   Molecular functionHydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentnucleolus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionribonuclease P activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 169169Ribonuclease P/MRP protein subunit POP5
PRO_0000239009

Sequences

Sequence LengthMass (Da)Tools
Q5BJI6 [UniParc].

Last modified April 12, 2005. Version 1.
Checksum: E0C78539E13B9880

FASTA16919,306
        10         20         30         40         50         60 
MVRFKSRYLL CELCVSEPSS LHLFEDKVVY QALRGAVNRA HGDYGAAIFN ITLGVLVKYL 

        70         80         90        100        110        120 
NAHTGVVLIR CRKAHYRLVW SSLPFITFLE NRGQKVRCFF NCIHVGGTIR TSQKFLIKYN 

       130        140        150        160 
RQQLQRMLLD CKTDAEKQDV RKAILSCSLN LIKGEETDGS DDDGDEEDT 

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC091467 mRNA. Translation: AAH91467.1.
RefSeqNP_001013566.1. NM_001013548.1.
UniGeneDr.39115.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000075491; ENSDARP00000069973; ENSDARG00000053452.
GeneID541421.
KEGGdre:541421.

Organism-specific databases

CTD51367.
ZFINZDB-GENE-050320-123. pop5.

Phylogenomic databases

eggNOGNOG284693.
GeneTreeENSGT00390000012331.
HOGENOMHOG000293345.
HOVERGENHBG082157.
InParanoidQ5BJI6.
KOK03537.
OMACEVVSDD.
OrthoDBEOG7GTT69.
PhylomeDBQ5BJI6.
TreeFamTF317496.

Gene expression databases

BgeeQ5BJI6.

Family and domain databases

InterProIPR016819. RNase_P/MRP_POP5.
IPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFPIRSF023803. Ribonuclease_P_prd. 1 hit.
ProtoNetSearch...

Other

NextBio20879231.
PROQ5BJI6.

Entry information

Entry namePOP5_DANRE
AccessionPrimary (citable) accession number: Q5BJI6
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: April 12, 2005
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families