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Protein
Submitted name:

ZMYND11 protein

Gene

ZMYND11

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
ZMYND11 proteinImported
Gene namesi
Name:ZMYND11Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA128394578.

PTM / Processingi

Proteomic databases

EPDiQ5BJG6.
PRIDEiQ5BJG6.

Expressioni

Gene expression databases

BgeeiQ5BJG6.
GenevisibleiQ5BJG6. HS.

Interactioni

Protein-protein interaction databases

IntActiQ5BJG6. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ5BJG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini92 – 14453BromoInterPro annotationAdd
BLAST
Domaini186 – 23752PWWPInterPro annotationAdd
BLAST
Domaini469 – 50436MYND-typeInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili393 – 42432Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOVERGENiHBG054949.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR000313. PWWP_dom.
IPR002893. Znf_MYND.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
PF00855. PWWP. 1 hit.
[Graphical view]
SMARTiSM00297. BROMO. 1 hit.
SM00293. PWWP. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS50014. BROMODOMAIN_2. 1 hit.
PS50812. PWWP. 1 hit.
PS01360. ZF_MYND_1. 1 hit.
PS50865. ZF_MYND_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5BJG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRVHGMHPK ETTRQLSLAV KDGLIVETLT VGCKGSKAGI EQEGYWLPGD
60 70 80 90 100
EISIKKKNTN KQEMGTYLRF IVSRMKERAI DLNKKGKDNK HPMYRRLVHS
110 120 130 140 150
AVDVPTIQEK VNEGKYRSYE EFKADAQLLL HNTVIFYGAD SEQADIARML
160 170 180 190 200
YKDTCHELDE LQLCKNCFYL SNARPDNWFC YPCIPNHELV WAKMKGFGFW
210 220 230 240 250
PAKVMQKEDN QVDVRFFGHH HQRAWIPSEN IQDITVNIHR LHVKRSMGWK
260 270 280 290 300
KACDELELHQ RFLREGRFWK SKNEDRGEEE AESSISSTSN EQLKVTQEPR
310 320 330 340 350
AKKGRRNQSV EPKKEEPEPE TEAVSSSQEI PTMPQPIEKV SVSTQTKKLS
360 370 380 390 400
ASSPRMLHRS TQTTNDGVCQ SMCHDKYTKI FNDFKDRMKS DHKRETERVV
410 420 430 440 450
REALEKLRSE MEEEKRQAVN KAVANMQGEM DRKCKQVKEK CKEEFVEEIK
460 470 480 490 500
KLATQHKQLI SQTKKKQWCY NCEEEAMYHC CWNTSYCSIK CQQEHWHAEH

KRTCRRKR
Length:508
Mass (Da):59,666
Last modified:April 12, 2005 - v1
Checksum:i0038F7B3D96C7181
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC091489 mRNA. Translation: AAH91489.1.
RefSeqiNP_001189393.1. NM_001202464.1.
NP_001189394.1. NM_001202465.1.
NP_001189395.1. NM_001202466.1.
NP_006615.2. NM_006624.5.
UniGeneiHs.292265.
Hs.740145.

Genome annotation databases

GeneIDi10771.
KEGGihsa:10771.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC091489 mRNA. Translation: AAH91489.1.
RefSeqiNP_001189393.1. NM_001202464.1.
NP_001189394.1. NM_001202465.1.
NP_001189395.1. NM_001202466.1.
NP_006615.2. NM_006624.5.
UniGeneiHs.292265.
Hs.740145.

3D structure databases

ProteinModelPortaliQ5BJG6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ5BJG6. 2 interactions.

Proteomic databases

EPDiQ5BJG6.
PRIDEiQ5BJG6.

Protocols and materials databases

DNASUi10771.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10771.
KEGGihsa:10771.

Organism-specific databases

CTDi10771.
PharmGKBiPA128394578.

Phylogenomic databases

HOVERGENiHBG054949.

Miscellaneous databases

ChiTaRSiZMYND11. human.
GenomeRNAii10771.

Gene expression databases

BgeeiQ5BJG6.
GenevisibleiQ5BJG6. HS.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR000313. PWWP_dom.
IPR002893. Znf_MYND.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
PF00855. PWWP. 1 hit.
[Graphical view]
SMARTiSM00297. BROMO. 1 hit.
SM00293. PWWP. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS50014. BROMODOMAIN_2. 1 hit.
PS50812. PWWP. 1 hit.
PS01360. ZF_MYND_1. 1 hit.
PS50865. ZF_MYND_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Peripheral Nervous SystemImported.

Entry informationi

Entry nameiQ5BJG6_HUMAN
AccessioniPrimary (citable) accession number: Q5BJG6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 12, 2005
Last sequence update: April 12, 2005
Last modified: June 8, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.