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Q5B3J7 (Q5B3J7_EMENI) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length816 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
Q5B3J7 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: F3B92F444A46C6EB

FASTA81690,777
        10         20         30         40         50         60 
MSSPAKKRKR DTQPTRSIAS FFQGQTAKQT EKSEQLASLA DTEQHLSDEA LARKLQAEWN 

        70         80         90        100        110        120 
NEQDFASPAT VPHSEPTAAS PSPEKDREQK KAKVGVLSLQ SSTGTEDTIS LSVPFDQSPL 

       130        140        150        160        170        180 
VFDSSRYAGE LKAHWSAEGG NASYALLTRA FVLANSTTSR IKIVDTLVNF LRVLIEGDPS 

       190        200        210        220        230        240 
SVLPAVWLAT NSISPPYHEL ELGLGGSSIS KAFKKIYGLN SQGLKSLYDR LGDAGDVAFE 

       250        260        270        280        290        300 
AKKRQSFTLI KPKPLSIKGV YQSLIKIAMS KGSGSQELKQ RIVEKLLQDT RGAEESRYIV 

       310        320        330        340        350        360 
RTLVQNLRIG AVKTTMLIAL ARAFLVSKPD NATFTVHSQH ELARLKKEEL AEIYSSAEEL 

       370        380        390        400        410        420 
VKASYARHPN YNDLVPCLLE IGVTEELLLR CGLQLHIPLM PMLGSITRDL SEMLTKLQGR 

       430        440        450        460        470        480 
DFTCEFKYDG QRAQVHCDEA GKVSIFSRHL EEMTEKYPDL VSLVPQIRGE GVSSFILEGE 

       490        500        510        520        530        540 
VVAVDQNGEL QPFQILTNRA KKNVDIGEIK INVCLFAFDL MYLNGAPLLE RSLRERRELL 

       550        560        570        580        590        600 
RSLFMEIPNR FTWVKSLDAT SADSEAVLDF FKSATENKCE GIMVKVLDNT LATNGSDSTN 

       610        620        630        640        650        660 
SSITATPKAE AKETKKGGRR KALLSSYEPD KRLESWLKVK KDYSASSETL DLIPVAGWHG 

       670        680        690        700        710        720 
NGRKAKWWSP ILLAVRNPET GGLQAVTKCM SGFSDKFYQA NKEKYEEGSP NVISRPSYVE 

       730        740        750        760        770        780 
YNGEPDVWFE PQEVWEMAFA DITLSPTYPA AIGLRFSDRS LQGISPMPVD DLQLCYRWQE 

       790        800        810 
NVKGRILAER ASAESIVATQ LKRPYVALMN IIDYQT

« Hide

References

« Hide 'large scale' references
[1]"Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae."
Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S., Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J., Kapitonov V., Jurka J., Scazzocchio C., Farman M.L., Butler J., Purcell S., Harris S., Braus G.H. expand/collapse author list , Draht O., Busch S., D'Enfert C., Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S., Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U., Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T., Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W., Caddick M.X., Hynes M., Paoletti M., Fischer R., Miller B.L., Dyer P.S., Sachs M.S., Osmani S.A., Birren B.W.
Nature 438:1105-1115(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.
[2]"The 2008 update of the Aspergillus nidulans genome annotation: a community effort."
Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M., Estrada C.G. expand/collapse author list , Geysens S., Goldman G., de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B., van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.
Fungal Genet. Biol. 46:S2-13(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.
[3]"The 2008 update of the Aspergillus nidulans genome annotation: A community effort."
Russo Wortman J., Mabey Gilsenan J., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H., Doonan J., Driessen A.J.M., Durek P., Espeso E., Fekete E., Flipphi M., Garcia Estrada C. expand/collapse author list , Geysens S., Goldman G., de Groot P.W.J., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A.K.W., Kim J-M., van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P., Liu B., MacCabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Posci I., Punt P.J., Ram A.F.J., Ren Q., Robellet X., Robson G., Seiboth B., van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H., van der Vondervoot P.J.I., de Vries R.P., Walton J., Xiang X., Xiong Y., Ping Zeng A., Brandt B.W., Cornell M.J., van den Hondel C.A.M.J.J., Visser J., Oliver S.G., Turner G.
Fungal Genet. Biol. 46:S2-S13(2009)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: FGSC A4 EMBL CBF76559.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BN001303 Genomic DNA. Translation: CBF76559.1.
AACD01000084 Genomic DNA. Translation: EAA60961.1.
RefSeqXP_662487.1. XM_657395.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING162425.CADANIAP00005522.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCADANIAT00005522; CADANIAP00005522; CADANIAG00005522.
GeneID2872686.
KEGGani:AN4883.2.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036006.
KOK10747.
OMAGAVKTTM.
OrthoDBEOG4SFDF2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5B3J7_EMENI
AccessionPrimary (citable) accession number: Q5B3J7
Secondary accession number(s): C8V9T7
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: April 3, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info