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Q5B061

- Q5B061_EMENI

UniProt

Q5B061 - Q5B061_EMENI

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Protein
DNA ligase
Gene
AN6069.2
Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: RefGenome

GO - Biological processi

  1. DNA ligation Source: RefGenome
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. lagging strand elongation Source: RefGenome
  5. nucleotide-excision repair Source: RefGenome
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:AN6069.2Imported
OrganismiEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)Imported
Taxonomic identifieri227321 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: RefGenome
  2. mitochondrion Source: RefGenome
  3. nucleus Source: RefGenome
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi162425.CADANIAP00006948.

Structurei

3D structure databases

ProteinModelPortaliQ5B061.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5B061-1 [UniParc]FASTAAdd to Basket

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MPDPKEGKQA TLGYVKDRQS TLGRFFGSNT NAPKKQTILS FGGNRSKSTS    50
ASRPNREPSS LNGNTKNASA VTRGDDVNTG DAFEVKPEMR AGADQNPLKR 100
DKSEDVSDSD ESEKVQPSNK RRRKSSGKTP AKPQIDSSPE STKGRKSQVK 150
EPTPEIVVKA SGEETPEDPD VSEAEEEGLS ASEDETDKKP ELKKKEIEKV 200
QATIKGSGND PYPDWQPGEP VPYAALCTTF SLIEMTTKRL QILAHCSLFL 250
RQVLRLTPQD FLPTVQLMIN KLAADYAGIE LGIGESLIMK AIGESTGRSL 300
AVIKADQHEI GDLGLVAAKS RSNQPTMFKP KALTVRGVHE GLLNIAKVQG 350
HGAQDKKISG IKKLLSAADA ATTGKGSKGI DITKNKGGPS EAKYIVRFLE 400
GKLRLGLAEK TVLVALAQAV VSHEAALKGK KAPSAEELAE GEAILKTVYS 450
ELPAYEVIIP ALLEHGLSNL REHCKLQPGI PIKPMLAKPT KSITEVLDRF 500
EGKDFTCEYK YDGERAQIHY VAPDETKNYP GAQLTLKESA GLSAIFSRNS 550
EDLSKKYPDV LAKLSTWIKP GVKSFVLDCE TVAWDVEAKK VLPFQQLMTR 600
KRKDVKAEDV KVKVCVFAFD LLFLNGEPTV KKPLRQRRDL LHSSFQPIEG 650
EFQFAQYGNT NDLEQIQTLL DDSVKASCEG LMVKMLDTEE SGYEPSKRSR 700
NWLKVKKDYL AGVGDSLDLL VLGAYYGRGK RTSVYGAFLL AAYNSNSQTY 750
ETICNIGTGF SEAMLDELHT TLSPLVIDRP KPFYSHSTVP KDQPDVWLEP 800
RYVWEVKTAD LTLSPRYKAA ADEFVGTTGG GGKGVSLRFP RFIKVRDDKK 850
PEQATTTRAV AEMYRKQEAV AKEGSGKGGV DDDFEY 886
Length:886
Mass (Da):97,263
Last modified:April 26, 2005 - v1
Checksum:iECFC100F297606E0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACD01000104 Genomic DNA. Translation: EAA58044.1.
RefSeqiXP_663673.1. XM_658581.1.

Genome annotation databases

GeneIDi2871154.
KEGGiani:AN6069.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACD01000104 Genomic DNA. Translation: EAA58044.1 .
RefSeqi XP_663673.1. XM_658581.1.

3D structure databases

ProteinModelPortali Q5B061.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 162425.CADANIAP00006948.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2871154.
KEGGi ani:AN6069.2.

Phylogenomic databases

eggNOGi COG1793.
KOi K10747.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.

Entry informationi

Entry nameiQ5B061_EMENI
AccessioniPrimary (citable) accession number: Q5B061
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

External Data

Dasty 3

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