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Q5B061

- Q5B061_EMENI

UniProt

Q5B061 - Q5B061_EMENI

Protein

DNA ligase

Gene

AN6069.2

Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (26 Apr 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: RefGenome

    GO - Biological processi

    1. DNA ligation Source: RefGenome
    2. DNA ligation involved in DNA repair Source: InterPro
    3. DNA recombination Source: UniProtKB-KW
    4. lagging strand elongation Source: RefGenome
    5. nucleotide-excision repair Source: RefGenome

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:AN6069.2Imported
    OrganismiEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)Imported
    Taxonomic identifieri227321 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus

    Subcellular locationi

    GO - Cellular componenti

    1. chromosome Source: RefGenome
    2. mitochondrion Source: RefGenome
    3. nucleus Source: RefGenome

    Interactioni

    Protein-protein interaction databases

    STRINGi162425.CADANIAP00006948.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5B061.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK10747.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5B061-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPDPKEGKQA TLGYVKDRQS TLGRFFGSNT NAPKKQTILS FGGNRSKSTS    50
    ASRPNREPSS LNGNTKNASA VTRGDDVNTG DAFEVKPEMR AGADQNPLKR 100
    DKSEDVSDSD ESEKVQPSNK RRRKSSGKTP AKPQIDSSPE STKGRKSQVK 150
    EPTPEIVVKA SGEETPEDPD VSEAEEEGLS ASEDETDKKP ELKKKEIEKV 200
    QATIKGSGND PYPDWQPGEP VPYAALCTTF SLIEMTTKRL QILAHCSLFL 250
    RQVLRLTPQD FLPTVQLMIN KLAADYAGIE LGIGESLIMK AIGESTGRSL 300
    AVIKADQHEI GDLGLVAAKS RSNQPTMFKP KALTVRGVHE GLLNIAKVQG 350
    HGAQDKKISG IKKLLSAADA ATTGKGSKGI DITKNKGGPS EAKYIVRFLE 400
    GKLRLGLAEK TVLVALAQAV VSHEAALKGK KAPSAEELAE GEAILKTVYS 450
    ELPAYEVIIP ALLEHGLSNL REHCKLQPGI PIKPMLAKPT KSITEVLDRF 500
    EGKDFTCEYK YDGERAQIHY VAPDETKNYP GAQLTLKESA GLSAIFSRNS 550
    EDLSKKYPDV LAKLSTWIKP GVKSFVLDCE TVAWDVEAKK VLPFQQLMTR 600
    KRKDVKAEDV KVKVCVFAFD LLFLNGEPTV KKPLRQRRDL LHSSFQPIEG 650
    EFQFAQYGNT NDLEQIQTLL DDSVKASCEG LMVKMLDTEE SGYEPSKRSR 700
    NWLKVKKDYL AGVGDSLDLL VLGAYYGRGK RTSVYGAFLL AAYNSNSQTY 750
    ETICNIGTGF SEAMLDELHT TLSPLVIDRP KPFYSHSTVP KDQPDVWLEP 800
    RYVWEVKTAD LTLSPRYKAA ADEFVGTTGG GGKGVSLRFP RFIKVRDDKK 850
    PEQATTTRAV AEMYRKQEAV AKEGSGKGGV DDDFEY 886
    Length:886
    Mass (Da):97,263
    Last modified:April 26, 2005 - v1
    Checksum:iECFC100F297606E0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACD01000104 Genomic DNA. Translation: EAA58044.1.
    RefSeqiXP_663673.1. XM_658581.1.

    Genome annotation databases

    GeneIDi2871154.
    KEGGiani:AN6069.2.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACD01000104 Genomic DNA. Translation: EAA58044.1 .
    RefSeqi XP_663673.1. XM_658581.1.

    3D structure databases

    ProteinModelPortali Q5B061.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 162425.CADANIAP00006948.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 2871154.
    KEGGi ani:AN6069.2.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K10747.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139Imported.

    Entry informationi

    Entry nameiQ5B061_EMENI
    AccessioniPrimary (citable) accession number: Q5B061
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 26, 2005
    Last sequence update: April 26, 2005
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

    External Data

    Dasty 3