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Protein

Pre-mRNA-processing protein 45

Gene

PRP45

Organism
Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in pre-mRNA splicing.By similarity

GO - Biological processi

Keywordsi

Biological processmRNA processing, mRNA splicing

Names & Taxonomyi

Protein namesi
Recommended name:
Pre-mRNA-processing protein 45
Gene namesi
Name:PRP45
Ordered Locus Names:CAALFM_C602440CA
ORF Names:CaO19.12959, CaO19.5513
OrganismiCandida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Taxonomic identifieri237561 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeCandida/Lodderomyces cladeCandida
Proteomesi
  • UP000000559 Componenti: Chromosome 6

Organism-specific databases

CGDiCAL0000177849. PRP45.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus, Spliceosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000848161 – 286Pre-mRNA-processing protein 45Add BLAST286

Proteomic databases

PRIDEiQ5AC37.

Interactioni

Subunit structurei

Associated with the spliceosome.By similarity

Structurei

3D structure databases

SMRiQ5AC37.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SNW family.Curated

Phylogenomic databases

InParanoidiQ5AC37.
KOiK06063.
OrthoDBiEOG092C4HI5.

Family and domain databases

InterProiView protein in InterPro
IPR017862. SKI-int_prot_SKIP.
IPR004015. SKI-int_prot_SKIP_SNW-dom.
PANTHERiPTHR12096. PTHR12096. 1 hit.
PfamiView protein in Pfam
PF02731. SKIP_SNW. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5AC37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASCNLLVIQ TTSIIMFSSL LSRPVNSSYD PSYHFSPVTR EIKNDPTSNG
60 70 80 90 100
VVSTTKNATP LAPSKYDTTI PLKKRYPNLV HNFPKPELDE NVILETKKII
110 120 130 140 150
DSILNPSDEP TNDINYIKYE NPNPNPNPNP NPNQEQQQQS SSSSSKIIQI
160 170 180 190 200
KQFQEDPMLP PKFKLRKNRH ERIIEDVTFV KDLKTKKLTK EDREFWNIPA
210 220 230 240 250
AVSNWKNSQG FTIGLDKRMI GREHVPIEMN IEKFNDLSTA LSDADLQARE
260 270 280
DLKQRNEIRQ QKQLQEKRLR DEKIKEIANR SKRRRY
Length:286
Mass (Da):33,200
Last modified:April 26, 2005 - v1
Checksum:iEE23347794848E77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP017628 Genomic DNA. Translation: AOW30177.1.
RefSeqiXP_719078.1. XM_713985.1.

Genome annotation databases

GeneIDi3639166.
KEGGical:CAALFM_C602440CA.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP017628 Genomic DNA. Translation: AOW30177.1.
RefSeqiXP_719078.1. XM_713985.1.

3D structure databases

SMRiQ5AC37.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ5AC37.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3639166.
KEGGical:CAALFM_C602440CA.

Organism-specific databases

CGDiCAL0000177849. PRP45.

Phylogenomic databases

InParanoidiQ5AC37.
KOiK06063.
OrthoDBiEOG092C4HI5.

Miscellaneous databases

PROiPR:Q5AC37.

Family and domain databases

InterProiView protein in InterPro
IPR017862. SKI-int_prot_SKIP.
IPR004015. SKI-int_prot_SKIP_SNW-dom.
PANTHERiPTHR12096. PTHR12096. 1 hit.
PfamiView protein in Pfam
PF02731. SKIP_SNW. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPRP45_CANAL
AccessioniPrimary (citable) accession number: Q5AC37
Secondary accession number(s): A0A1D8PPV8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: April 26, 2005
Last modified: June 7, 2017
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Candida albicans
    Candida albicans: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.