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Q5AC37 (PRP45_CANAL) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Pre-mRNA-processing protein 45
Gene names
Name:PRP45
ORF Names:CaO19.12959, CaO19.5513
OrganismCandida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) [Reference proteome]
Taxonomic identifier237561 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesmitosporic SaccharomycetalesCandida

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in pre-mRNA splicing By similarity.

Subunit structure

Associated with the spliceosome By similarity.

Subcellular location

Nucleus By similarity.

Sequence similarities

Belongs to the SNW family.

Ontologies

Keywords
   Biological processmRNA processing
mRNA splicing
   Cellular componentNucleus
Spliceosome
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processmRNA splicing, via spliceosome

Inferred from electronic annotation. Source: InterPro

   Cellular_componentspliceosomal complex

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 286286Pre-mRNA-processing protein 45
PRO_0000084816

Sequences

Sequence LengthMass (Da)Tools
Q5AC37 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: EE23347794848E77

FASTA28633,200
        10         20         30         40         50         60 
MASCNLLVIQ TTSIIMFSSL LSRPVNSSYD PSYHFSPVTR EIKNDPTSNG VVSTTKNATP 

        70         80         90        100        110        120 
LAPSKYDTTI PLKKRYPNLV HNFPKPELDE NVILETKKII DSILNPSDEP TNDINYIKYE 

       130        140        150        160        170        180 
NPNPNPNPNP NPNQEQQQQS SSSSSKIIQI KQFQEDPMLP PKFKLRKNRH ERIIEDVTFV 

       190        200        210        220        230        240 
KDLKTKKLTK EDREFWNIPA AVSNWKNSQG FTIGLDKRMI GREHVPIEMN IEKFNDLSTA 

       250        260        270        280 
LSDADLQARE DLKQRNEIRQ QKQLQEKRLR DEKIKEIANR SKRRRY 

« Hide

References

[1]"The diploid genome sequence of Candida albicans."
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W., Scherer S.
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SC5314 / ATCC MYA-2876.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACQ01000034 Genomic DNA. Translation: EAL00180.1.
AACQ01000033 Genomic DNA. Translation: EAL00302.1.
RefSeqXP_719078.1. XM_713985.1.
XP_719195.1. XM_714102.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING5476.CAL0006088.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3639050.
3639166.
KEGGcal:CaO19.12959.
cal:CaO19.5513.

Organism-specific databases

CGDCAL0006088. orf19.5513.

Phylogenomic databases

eggNOGNOG295848.
KOK06063.
OrthoDBEOG725DVD.

Family and domain databases

InterProIPR017862. SKI-int_prot_SKIP.
IPR004015. SKI-int_prot_SKIP_SNW-dom.
[Graphical view]
PANTHERPTHR12096. PTHR12096. 1 hit.
PfamPF02731. SKIP_SNW. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePRP45_CANAL
AccessionPrimary (citable) accession number: Q5AC37
Entry history
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: April 26, 2005
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Candida albicans

Candida albicans: entries and gene names