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Protein
Submitted name:

X-ray repair cross complementing protein 1 variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

SignaLinkiQ59HH7.

Names & Taxonomyi

Protein namesi
Submitted name:
X-ray repair cross complementing protein 1 variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA369.

PTM / Processingi

Proteomic databases

PaxDbiQ59HH7.

Expressioni

Gene expression databases

GenevisibleiQ59HH7. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000262887.

Structurei

3D structure databases

ProteinModelPortaliQ59HH7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini329 – 41789BRCTInterPro annotationAdd
BLAST
Domaini552 – 64392BRCTInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3226. Eukaryota.
ENOG410ZE1H. LUCA.
HOGENOMiHOG000111006.
HOVERGENiHBG052992.
KOiK10803.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR008979. Galactose-bd-like.
IPR002706. Xrcc1_N.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF16589. BRCT_2. 1 hit.
PF01834. XRCC1_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50172. BRCT. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q59HH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
STSSFWPGEA HDVDMPEIRL RHVVSCSSQD STHCAENLLK ADTYRKWRAA
60 70 80 90 100
KAGEKTISVV LQLEKEEQIH SVDIGNDGSA FVEVLVGSSA GGAGEQDYEV
110 120 130 140 150
LLVTSSFMSP SESRSGSNPN RVRMFGPDKL VRAAAEKRWD RVKIVCSQPY
160 170 180 190 200
SKDSPFGLSF VRFHSPPDKD EAEAPSQKVT VTKLGQFRVK EEDESANSLR
210 220 230 240 250
PGALFFSRIN KTSPVTASDP AGPSYAAATL QASSAASSAS PVSRAIGSTS
260 270 280 290 300
KPQESPKGKR KLDLNQEEKK TPSKPPAQLS PSVPKRPKLP APTRTPATAP
310 320 330 340 350
VPARAQGAVT GKPRGEGTEP RRPRAGPEEL GKILQGVVVV LSGFQNPFRS
360 370 380 390 400
ELRDKALELG AKYRPDWTRD STHLICAFAN TPKYSQVLGL GGRIVRKEWV
410 420 430 440 450
LDCHRMRRRL PSQRYLMAGP GSSSEEDEAS HSGGSGDEAP KLPQKQPQTK
460 470 480 490 500
TKPTQAAGPS SPQKPPTPEE TKAASPVLQE DIDIEGVQSE GQDNGAEDSG
510 520 530 540 550
DTEDELRRVA EQKEHRLPPG QEENGEDPYA GSTDENTDSE EHQEPPDLPV
560 570 580 590 600
PELPDFFQGK HFFLYGEFPG DERRKLIRYV TAFNGELEDY MSDRVQFVIT
610 620 630 640
AQEWDPSFEE ALMDNPSLAF VRPRWIYSCN EKQKLLPHQL YGVVPQA
Length:647
Mass (Da):71,014
Last modified:April 26, 2005 - v1
Checksum:i881FBDB515E9926E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB208781 mRNA. Translation: BAD92018.1.
RefSeqiNP_006288.2. NM_006297.2.
UniGeneiHs.98493.

Genome annotation databases

GeneIDi7515.
KEGGihsa:7515.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB208781 mRNA. Translation: BAD92018.1.
RefSeqiNP_006288.2. NM_006297.2.
UniGeneiHs.98493.

3D structure databases

ProteinModelPortaliQ59HH7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000262887.

Proteomic databases

PaxDbiQ59HH7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7515.
KEGGihsa:7515.

Organism-specific databases

CTDi7515.
PharmGKBiPA369.

Phylogenomic databases

eggNOGiKOG3226. Eukaryota.
ENOG410ZE1H. LUCA.
HOGENOMiHOG000111006.
HOVERGENiHBG052992.
KOiK10803.

Enzyme and pathway databases

SignaLinkiQ59HH7.

Miscellaneous databases

GenomeRNAii7515.

Gene expression databases

GenevisibleiQ59HH7. HS.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR008979. Galactose-bd-like.
IPR002706. Xrcc1_N.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF16589. BRCT_2. 1 hit.
PF01834. XRCC1_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50172. BRCT. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Homo sapiens protein coding cDNA."
    Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ59HH7_HUMAN
AccessioniPrimary (citable) accession number: Q59HH7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: June 8, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.