Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Protocadherin gamma subfamily A, 3 isoform 1 variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cell adhesionSAAS annotation

Keywords - Ligandi

CalciumUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protocadherin gamma subfamily A, 3 isoform 1 variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ59H32.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000253812.

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

HOGENOMiHOG000220892.
HOVERGENiHBG054878.

Family and domain databases

Gene3Di2.60.40.60. 6 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
[Graphical view]
PfamiPF00028. Cadherin. 4 hits.
PF08266. Cadherin_2. 1 hit.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 6 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 6 hits.
PROSITEiPS00232. CADHERIN_1. 5 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q59H32-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KTSFLEKIRL ESVVGNWNRI QRKRFTEKEM TNCLSFRNGR GLALLCALLG
60 70 80 90 100
TLCETGSGQI RYSVSEELDK GSFVGNIAND LGLEPRELAE RGVRIVSRGR
110 120 130 140 150
TQLFSLNSQS GSLVTAERID REELCAQIPL CLVKINILVE DKLKIFEVEI
160 170 180 190 200
EIKDINDNAP NFPTEELEIK IGELTVPGTR FPIKTAFDPD VGINSLQNYK
210 220 230 240 250
LSPNDYFSLA VNSVSEGAKY PELVLERALD REKKEIHQLV LVASDGGDPV
260 270 280 290 300
HSGNLHIQVI VLDANDNPPM FTQPEYRVSV WENVPVGTRL LTVNATDPDE
310 320 330 340 350
GFNAQVSYIL DKMPGKIAEI FHLNSVSGEV SILKSLDYED AMFYEIKIEA
360 370 380 390 400
QDGPGLLSRA KILVTVLDVN DNAPEITITS LTSSVPEEGT VGREIALIDV
410 420 430 440 450
HDRDSGQNGQ VEVFVLGNLP FKLEKSIDQY YRLVTATSLD REQISEYNIS
460 470 480 490 500
LRASDGGSPP LSTETHITLH VIDINDNPPT FPHLSYSAYI PENNPRGASI
510 520 530 540 550
FSVTAQDPDS NNNARITYAL TEDTLQGAPL SSFVSINSNT GVLYALRSFD
560 570 580 590 600
YEQFRDLKLL VTASDSGNPP LSSNVSLNLF VLDQNDNAPE ILYPALPTDG
610 620 630 640 650
STGVELAPRS AEPGYLVTKV VAVDRDSGQN AWLSYRLLKA SEPGLFSVGL
660 670 680 690 700
HTGEVRTARA LLDRDALKQS LVVAVQDHGQ PPLSATVTLT VAVADRIPDI
710 720 730 740 750
LADLGSLEPS AKPNDSDLTL YLVVAVAAVS CVFLAFVIVL LALRLRRWHK
760 770 780 790 800
SRLLQASGGG LASTPGSHFV GADGVRAFLQ TYSHEVSLTA DSRKSHLIFP
810 820 830 840 850
QPNYADTLIS QESCEKSEPL LITQDLLEMK GDSNLLQQAP PNTDWRFSQA
860 870 880 890 900
QRPGTSGSQN GDDTGTWPNN QFDTEMLQAM ILASASEAAD GSSTLGGGAG
910 920 930 940 950
TMGLSARYGP QFTLQHVPDY RQNVYIPGSN ATLTNAAGKR DGKAPAGGNG
960
NKKKSGKKEK K
Length:961
Mass (Da):104,536
Last modified:April 26, 2005 - v1
Checksum:iB0BB55883E84BCD2
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB208927 mRNA. Translation: BAD92164.1.
UniGeneiHs.368160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB208927 mRNA. Translation: BAD92164.1.
UniGeneiHs.368160.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000253812.

Proteomic databases

PRIDEiQ59H32.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000220892.
HOVERGENiHBG054878.

Family and domain databases

Gene3Di2.60.40.60. 6 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
[Graphical view]
PfamiPF00028. Cadherin. 4 hits.
PF08266. Cadherin_2. 1 hit.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 6 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 6 hits.
PROSITEiPS00232. CADHERIN_1. 5 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Homo sapiens protein coding cDNA."
    Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ59H32_HUMAN
AccessioniPrimary (citable) accession number: Q59H32
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: June 24, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.