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Unreviewed, UniProtKB/TrEMBL Q59GD8 (Q59GD8_HUMAN)

Last modified January 19, 2010. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Calcium channel, voltage-dependent, L type, alpha 1D subunit variant EMBL BAD92408.1
OrganismHomo sapiens (Human) EMBL BAD92408.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length1854 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003808V0.

Sequence similarities

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification]

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD92408.1

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Sequences

Sequence LengthMass (Da)Tools
Q59GD8-1 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: 73DE6B07DF531A39

FASTA1,854211,464
        10         20         30         40         50         60 
ANGTECRSGW VGPNGGITNF DNFAFAMLTV FQCITMEGWT DVLYWMNDAM GFELPWVYFV 

        70         80         90        100        110        120 
SLVIFGSFFV LNLVLGVLSG EFSKEREKAK ARGDFQKLRE KQQLEEDLKG YLDWITQAED 

       130        140        150        160        170        180 
IDPENEEEGG EEGKRNTSMP TSETESVNTE NVSGEGENRG CCGSLWCWWR RRGAAKAGPS 

       190        200        210        220        230        240 
GCRRWGQAIS KSKLSRRWRR WNRFNRRRCR AAVKSVTFYW LVIVLVFLNT LTISSEHYNQ 

       250        260        270        280        290        300 
PDWLTQIQDI ANKVLLALFT CEMLVKMYSL GLQAYFVSLF NRFDCFVVCG GITETILVEL 

       310        320        330        340        350        360 
EIMSPLGISV FRCVRLLRIF KVTRHWTSLS NLVASLLNSM KSIASLLLLL FLFIIIFSLL 

       370        380        390        400        410        420 
GMQLFGGKFN FDETQTKRST FDNFPQALLT VFQILTGEDW NAVMYDGIMA YGGPSSSGMI 

       430        440        450        460        470        480 
VCIYFIILFI CGNYILLNVF LAIAVDNLAD AESLNTAQKE EAEEKERKKI ARKESLENKK 

       490        500        510        520        530        540 
NNKPEVNQIA NSDNKVTIDD YREEDEDKDP YPPCDVPVGE EEEEEEEDEP EVPAGPRPRR 

       550        560        570        580        590        600 
ISELNMKEKI APIPEGSAFF ILSKTNPIRV GCHKLINHHI FTNLILVFIM LSSAALAAED 

       610        620        630        640        650        660 
PIRSHSFRNT ILGYFDYAFT AIFTVEILLK MTTFGAFLHK GAFCRNYFNL LDMLVVGVSL 

       670        680        690        700        710        720 
VSFGIQSSAI SVVKILRVLR VLRPLRAINR AKGLKHVVQC VFVAIRTIGN IMIVTTLLQF 

       730        740        750        760        770        780 
MFACIGVQLF KGKFYRCTDE AKSNPEECRG LFILYKDGDV DSPVVRERIW QNSDFNFDNV 

       790        800        810        820        830        840 
LSAMMALFTV STFEGWPALL YKAIDSNGEN IGPIYNHRVE ISIFFIIYII IVAFFMMNIF 

       850        860        870        880        890        900 
VGFVIVTFQE QGEKEYKNCE LDKNQRQCVE YALKARPLRR YIPKNPYQYK FWYVVNSSPF 

       910        920        930        940        950        960 
EYMMFVLIML NTLCLAMQHY EQSKMFNDAM DILNMVFTGV FTVEMVLKVI AFKPKHYFTD 

       970        980        990       1000       1010       1020 
AWNTFDALIV VGSVVDIAIT EVNPTESENV PVPTATPGNS EESNRISITF FRLFRVMRLV 

      1030       1040       1050       1060       1070       1080 
KLLSRGEGIR TLLWTFIKSF QALPYVALLI AMLFFIYAVI GMQMFGKVAM RDNNQINRNN 

      1090       1100       1110       1120       1130       1140 
NFQTFPQAVL LLFRCATGEA WQEIMLACLP GKLCDPESDY NPGEEYTCGS NFAIVYFISF 

      1150       1160       1170       1180       1190       1200 
YMLCAFLIIN LFVAVIMDNF DYLTRDWSIL GPHHLDEFKR IWSEYDPEAK GRIKHLDVVT 

      1210       1220       1230       1240       1250       1260 
LLRRIQPPLG FGKLCPHRVA CKRLVAMNMP LNSDGTVMFN ATLFALVRTA LKIKTEGNLE 

      1270       1280       1290       1300       1310       1320 
QANEELRAVI KKIWKKTSMK LLDQVVPPAG DDEVTVGKFY ATFLIQDYFR KFKKRKEQGL 

      1330       1340       1350       1360       1370       1380 
VGKYPAKNTT IALQAGLRTL HDIGPEIRRA ISCDLQDDEP EETKREEEDD VFKRNGALLG 

      1390       1400       1410       1420       1430       1440 
NHVNHVNSDR RDSLQQTNTT HRPLHVQRPS IPPASDTEKP LFPPAGNSVC HNHHNHNSIG 

      1450       1460       1470       1480       1490       1500 
KQVPTSTNAN LNNANMSKAA HGKRPSIGNL EHVSENGHHS SHKHDREPQR RSSVKRTRYY 

      1510       1520       1530       1540       1550       1560 
ETYIRSDSGD EQLPTICRED PEIHGYFRDP HCLGEQEYFS SEECYEDDSS PTWSRQNYGY 

      1570       1580       1590       1600       1610       1620 
YSRYPGRNID SERPRGYHHP QGFLEDDDSP VCYDSRRSPR RRLLPPTPAS HRRSSFNFEC 

      1630       1640       1650       1660       1670       1680 
LRRQSSQEEV PSSPIFPHRT ALPLHLMQQQ IMAVAGLDSS KAQKYSPSHS TRSWATPPAT 

      1690       1700       1710       1720       1730       1740 
PPYRDWTPCY TPLIQVEQSE ALDQVNGSLP SLHRSSWYTD EPDISYRTFT PASLTVPSSF 

      1750       1760       1770       1780       1790       1800 
RNKNSDKQRS ADSLVEAVLI SEGLGRYARD PKFVSATKHE IADACDLTID EMESAASTLL 

      1810       1820       1830       1840       1850 
NGNVRPRANG DVGPLSHRQD YELQDFGPGY SDEEPDPGRD EEDLADEMIC ITTL

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References

[1]"Homo sapiens protein coding cDNA."
Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL BAD92408.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB209171 mRNA. Translation: BAD92408.1.
IPIIPI00947531.
RefSeqNP_000711.1.
NP_001122312.1.
UniGeneHs.476358

3D structure databases

SMRQ59GD8. Positions 574-656, 892-1161, 1293-1321.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ59GD8.

Genome annotation databases

EnsemblENST00000481478; ENSP00000418014; ENSG00000157388; Homo sapiens. [Genome view]
GeneID776.
KEGGhsa:776.
UCSCuc003dgw.2. human.

Organism-specific databases

CTD776.
HGNCHGNC:1391. CACNA1D.

Phylogenomic databases

HOGENOMHBG713873.
HOVERGENQ59GD8.

Gene expression databases

ArrayExpressQ59GD8.
BgeeQ59GD8.

Family and domain databases

InterProIPR005821. Ion_trans.
IPR005452. LVDCC_a1dsu.
IPR014873. VDCC_a1su_IQ.
IPR002077. VDCCAlpha1.
[Graphical view]
PANTHERPTHR10037:SF48. LVDCCAlpha1D. 1 hit.
PfamPF08763. Ca_chan_IQ. 1 hit.
PF00520. Ion_trans. 4 hits.
[Graphical view]
PRINTSPR00167. CACHANNEL.
PR01636. LVDCCALPHA1D.
ProtoNetSearch...

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Entry information

Entry nameQ59GD8_HUMAN
AccessionPrimary (citable) accession number: Q59GD8
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: January 19, 2010
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information