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Q59FQ1 (Q59FQ1_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Low density lipoprotein receptor variant EMBL BAD92646.1
OrganismHomo sapiens (Human) EMBL BAD92646.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length870 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD92646.1

Sequences

Sequence LengthMass (Da)Tools
Q59FQ1 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: 8CBE8F9DB35E01F5

FASTA87096,163
        10         20         30         40         50         60 
SGSGHCLAEA ASMGPWGWKL RWTVALLLAA AGTAVGDRCE RNEFQCQDGK CISYKWVCDG 

        70         80         90        100        110        120 
SAECQDGSDE SQETCLSVTC KSGDFSCGGR VNRCIPQFWR CDGQVDCDNG SDEQGCPPKT 

       130        140        150        160        170        180 
CSQDEFRCHD GKCISRQFVC DSDRDCLDGS DEASCPVLTC GPASFQCNSS TCIPQLWACD 

       190        200        210        220        230        240 
NDPDCEDGSD EWPQRCRGLY VFQGDSSPCS AFEFHCLSGE CIHSSWRCDG GPDCKDKSDE 

       250        260        270        280        290        300 
ENCAVATCRP DEFQCSDGNC IHGSRQCDRE YDCKDMSDEV GCVNVTLCEG PNKFKCHSGE 

       310        320        330        340        350        360 
CITLDKVCNM ARDCRDWSDE PIKECGTNEC LDNNGGCSHV CNDLKIGYEC LCPDGFQLVA 

       370        380        390        400        410        420 
QRRCEDIDEC QDPDTCSQLC VNLEGGYKCQ CEEGFQLDPH TKACKAVGSI AYLFFTNRHE 

       430        440        450        460        470        480 
VRKMTLDRSE YTSLIPNLRN VVALDTEVAS NRIYWSDLSQ RMICSTQLDR AHGVSSYDTV 

       490        500        510        520        530        540 
ISRDIQAPDG LAVDWIHSNI YWTDSVLGTV SVADTKGVKR KTLFRENGSK PRAIVVDPVH 

       550        560        570        580        590        600 
GFMYWTDWGT PAKIKKGGLN GVDIYSLVTE NIQWPNGITL DLLSGRLYWV DSKLHSISSI 

       610        620        630        640        650        660 
DVNGGNRKTI LEDEKRLAHP FSLAVFEDKV FWTDIINEAI FSANRLTGSD VNLLAENLLS 

       670        680        690        700        710        720 
PEDMVLFHNL TQPRGVNWCE RTTLSNGGCQ YLCLPAPQIN PHSPKFTCAC PDGMLLARDM 

       730        740        750        760        770        780 
RSCLTEAEAA VATQETSTVR LKVSSTAVRT QHTTTRPVPD TSRLPGATPG LTTVEIVTMS 

       790        800        810        820        830        840 
HQALGDVAGR GNEKKPSSVR ALSIVLPIVL LVFLCLGVFL LWKNWRLKNI NSINFDNPVY 

       850        860        870 
QKTTEDEVHI CHNQDGYSYP SMVSLEDDVA

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References

[1]"Homo sapiens protein coding cDNA."
Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL BAD92646.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB209409 mRNA. Translation: BAD92646.1.
IPIIPI00983312.
RefSeqNP_001182727.1. NM_001195798.1.
UniGeneHs.213289.
Hs.728190.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ59FQ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3949.
KEGGhsa:3949.

Organism-specific databases

CTD3949.

Phylogenomic databases

HOGENOMHBG358235.
HOVERGENHBG006250.

Gene expression databases

ArrayExpressQ59FQ1.

Family and domain databases

InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR006210. EGF-like.
IPR001881. EGF-like_Ca-bd.
IPR013032. EGF-like_reg_CS.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR000742. EGF_3.
IPR018097. EGF_Ca-bd_CS.
IPR023415. LDLR_class-A_CS.
IPR000033. LDLR_classB_rpt.
IPR002172. LDrepeatLR_classA_rpt.
[Graphical view]
Gene3DG3DSA:2.120.10.30. 6-blade_b-propeller_TolB-like. 1 hit.
G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 7 hits.
KOK12473.
PfamPF07645. EGF_CA. 1 hit.
PF00057. Ldl_recept_a. 7 hits.
PF00058. Ldl_recept_b. 5 hits.
[Graphical view]
SMARTSM00181. EGF. 2 hits.
SM00179. EGF_CA. 1 hit.
SM00192. LDLa. 7 hits.
SM00135. LY. 5 hits.
[Graphical view]
SUPFAMSSF57424. LDL_rcpt_classA_cys-rich. 7 hits.
PROSITEPS00010. ASX_HYDROXYL. 2 hits.
PS01186. EGF_2. 2 hits.
PS50026. EGF_3. 2 hits.
PS01187. EGF_CA. 1 hit.
PS01209. LDLRA_1. 7 hits.
PS50068. LDLRA_2. 7 hits.
PS51120. LDLRB. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio15493.

Entry information

Entry nameQ59FQ1_HUMAN
AccessionPrimary (citable) accession number: Q59FQ1
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: January 25, 2012
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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