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Protein
Submitted name:

Patched variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Patched variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA33937.

PTM / Processingi

Proteomic databases

PRIDEiQ59FG5.

Expressioni

Gene expression databases

GenevisibleiQ59FG5. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000332353.

Family & Domainsi

Phylogenomic databases

KOiK06225.

Family and domain databases

InterProiIPR003392. Patched.
[Graphical view]
PfamiPF02460. Patched. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q59FG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PCRKSSALNS PKAAVVVVFN FAMVLLIFPA ILSMDLYRRE DRRLDIFCCF
60 70 80 90 100
TSPCVSRVIQ VEPQAYTDTH DNTRYSPPPP YSSHSFAHET QITMQSTVQL
110 120 130 140 150
RTEYDPHTHV YYTTAEPRSE ISVQPVTVTQ DTLSCQSPES TSSTRDLLSQ
160 170 180 190 200
FSDSSLHCLE PPCTKWTLSS FAEKHYAPFL LKPKAKVVVI FLFLGLLGVS
210 220 230 240 250
LYGTTRVRDG LDLTDIVPRE TREYDFIAAQ FKYFSFYNMY IVTQKADYPN
260 270 280 290 300
IQHLLYDLHR SFSNVKYVML EENKQLPKMW LHYFRDWLQG LQDAFDSDWE
310 320 330 340 350
TGKIMPNNYK NGSDDGVLAY KLLVQTGSRD KPIDISQLTK QRLVDADGII
360 370 380 390 400
NPSAFYIYLT AWVSNDPVAY AASQANIRPH RPEWVHDKAD YMPETRLRIP
410 420 430 440 450
AAEPIEYAQF PFYLNGLRDT SDFVEAIEKV RTICSNYTSL GLSSYPNGYP
460 470 480 490 500
FLFWEQYIGL RHWLLLFISV VLACTFLVCA VFLLNPWTAG IIVMVLALMT
510 520 530 540 550
VELFGMMGLI GIKLSAVPVV ILIASVGIGV EFTVHVALAF LTAIGDKNRR
560 570 580
AVLALEHMFA PVLDGAVSTL LGVLMLAGSE FDFIVR
Length:586
Mass (Da):66,404
Last modified:April 26, 2005 - v1
Checksum:i51F83447E29923CE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209495 mRNA. Translation: BAD92732.1.
RefSeqiNP_000255.2. NM_000264.3.
NP_001077071.1. NM_001083602.1.
NP_001077072.1. NM_001083603.1.
NP_001077073.1. NM_001083604.1.
NP_001077074.1. NM_001083605.1.
NP_001077075.1. NM_001083606.1.
NP_001077076.1. NM_001083607.1.
UniGeneiHs.494538.

Genome annotation databases

GeneIDi5727.
KEGGihsa:5727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209495 mRNA. Translation: BAD92732.1.
RefSeqiNP_000255.2. NM_000264.3.
NP_001077071.1. NM_001083602.1.
NP_001077072.1. NM_001083603.1.
NP_001077073.1. NM_001083604.1.
NP_001077074.1. NM_001083605.1.
NP_001077075.1. NM_001083606.1.
NP_001077076.1. NM_001083607.1.
UniGeneiHs.494538.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000332353.

Proteomic databases

PRIDEiQ59FG5.

Protocols and materials databases

DNASUi5727.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5727.
KEGGihsa:5727.

Organism-specific databases

CTDi5727.
PharmGKBiPA33937.

Phylogenomic databases

KOiK06225.

Miscellaneous databases

GenomeRNAii5727.
NextBioi22266.

Gene expression databases

GenevisibleiQ59FG5. HS.

Family and domain databases

InterProiIPR003392. Patched.
[Graphical view]
PfamiPF02460. Patched. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Homo sapiens protein coding cDNA."
    Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ59FG5_HUMAN
AccessioniPrimary (citable) accession number: Q59FG5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: June 24, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.