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Protein
Submitted name:

Ataxin-1 ubiquitin-like interacting protein variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ataxin-1 ubiquitin-like interacting protein variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiQ59F94.
PRIDEiQ59F94.

Interactioni

Protein-protein interaction databases

MINTiMINT-2854812.
STRINGi9606.ENSP00000357292.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini12 – 8675Ubiquitin-likeInterPro annotationAdd
BLAST
Domaini552 – 59746UBAInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0010. Eukaryota.
COG5272. LUCA.
HOVERGENiHBG064537.
KOiK04523.

Family and domain databases

InterProiIPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR015496. Ubiquilin.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PANTHERiPTHR10677. PTHR10677. 3 hits.
PfamiPF00627. UBA. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00727. STI1. 4 hits.
SM00165. UBA. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50030. UBA. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q59F94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AEPSGAETRP PIRVTVKTPK DKEEIVICDR ASVKEFKEEI SRRFKAQQDQ
60 70 80 90 100
LVLIFAGKIL KDGDTLNQHG IKDGLTVHLV IKTPQKAQDP AAATASSPST
110 120 130 140 150
PDPASAPSTT PASPATPAQP STSGSASSDA GSGSRRSSGG GPSPGAGEGS
160 170 180 190 200
PSATASILSG FGGILGLGSL GLGSANFMEL QQQMQRQLMS NPEMLSQIME
210 220 230 240 250
NPLVQDMMSN PDLMRHMIMA NPQMQQLMER NPEISHMLNN PELMRQTMEL
260 270 280 290 300
ARNPAMMQEM MRNQDRALSN LESIPGGYNA LRRMYTDIQE PMFSAAREQF
310 320 330 340 350
GNNPFSSLAG NSDSSSSQPL RTENREPLPN PWSPSPPTSQ APGSGGEGTG
360 370 380 390 400
GSGTSQVHPT VSNPFGINAA SLGSGMFNSP EMQALLQQIS ENPQLMQNVI
410 420 430 440 450
SAPYMRSMMQ TLAQNPDFAA QMMVNVPLFA GNPQLQEQLR LQLPVFLQQM
460 470 480 490 500
QNPESLSILT NPRAMQALLQ IQQGLQTLQT EAPGLVPSLG SFGMSRTPAP
510 520 530 540 550
SAGSNAGSTP EAPTSSPATP ATSSPTGASS AQQQLMQQMI QLLAGSGNSQ
560 570 580 590 600
VQTPEVRFQQ QLEQLNSMGF INREANLQAL IATGGDINAA IERLLGSQLS
Length:600
Mass (Da):63,740
Last modified:May 10, 2005 - v1
Checksum:iDFBA259E8A40BACD
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209566 mRNA. Translation: BAD92803.1.
RefSeqiNP_001291271.1. NM_001304342.1.
UniGeneiHs.283739.

Genome annotation databases

GeneIDi56893.
KEGGihsa:56893.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209566 mRNA. Translation: BAD92803.1.
RefSeqiNP_001291271.1. NM_001304342.1.
UniGeneiHs.283739.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-2854812.
STRINGi9606.ENSP00000357292.

Proteomic databases

PaxDbiQ59F94.
PRIDEiQ59F94.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi56893.
KEGGihsa:56893.

Organism-specific databases

CTDi56893.

Phylogenomic databases

eggNOGiKOG0010. Eukaryota.
COG5272. LUCA.
HOVERGENiHBG064537.
KOiK04523.

Miscellaneous databases

GenomeRNAii56893.

Family and domain databases

InterProiIPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR015496. Ubiquilin.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PANTHERiPTHR10677. PTHR10677. 3 hits.
PfamiPF00627. UBA. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00727. STI1. 4 hits.
SM00165. UBA. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50030. UBA. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Homo sapiens protein coding cDNA."
    Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ59F94_HUMAN
AccessioniPrimary (citable) accession number: Q59F94
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: April 13, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.