Q59F90 (Q59F90_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Brevican isoform 1 variant EMBL BAD92807.1
Organism	Homo sapiens (Human) EMBL BAD92807.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	850 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 C-type lectin domain. SAAS SAAS001304

Ontologies

Keywords
Domain	EGF-like domain SAAS SAAS016186 Repeat SAAS SAAS016186 Sushi SAAS SAAS000436
Ligand	Lectin SAAS SAAS016186
PTM	Disulfide bond SAAS SAAS000538
Gene Ontology (GO)
Biological_process	cell adhesion Inferred from electronic annotation. Source: InterPro hippocampus development Inferred from electronic annotation. Source: Compara
Cellular_component	proteinaceous extracellular matrix Inferred from electronic annotation. Source: Compara
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hyaluronic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAD92807.1

Sequences

	Sequence		Length	Mass (Da)
	Q59F90 [UniParc]. Last modified April 26, 2005. Version 1. Checksum: 39AEC874D036D430	FASTA	850	92,812
	10 20 30 40 50 60 LRPPPSRRAV LGSPRVKWTF LSRGREAEVL VARGVRVKVN EAYRFRVALP AYPASLTDVS 70 80 90 100 110 120 LALSELRPND SGIYRCEVQH GIDDSSDAVE VKVKGVVFLY REGSARYAFS FSGAQEACAR 130 140 150 160 170 180 IGAHIATPEQ LYAAYLGGYE QCDAGWLSDQ TVRYPIQTPR EACYGDMDGF PGVRNYGVVD 190 200 210 220 230 240 PDDLYDVYCY AEDLNGELFL GDPPEKLTLE EARAYCQERG AEIATTGQLY AAWDGGLDHC 250 260 270 280 290 300 SPGWLADGSV RYPIVTPSQR CGGGLPGVKT LFLFPNQTGF PNKHSRFNVY CFRDSAQPSA 310 320 330 340 350 360 IPEASNPASN PASDGLEAIV TVTETLEELQ LPQEATESES RGAIYSIPIM EDGGGGSSTP 370 380 390 400 410 420 EDPAEAPRTL LEFETQSMVP PTGFSEEEGK ALEEEEKYED EEEKEEEEEE EEVEDEALWA 430 440 450 460 470 480 WPSELSSPGP EASLPTEPAA QEESLSQAPA RAVLQPGASP LPDGESEASR PPRVHGPPTE 490 500 510 520 530 540 TLPTPRERNL ASPSPSTLVE AREVGEATGG PELSGVPRGE SEETGSSEGA PSLLPATRAP 550 560 570 580 590 600 EGTRELEAPS EDNSGRTAPA GTSVQAQPVL PTDSASRGGV AVVPASGDCV PSPCHNGGTC 610 620 630 640 650 660 LEEEEGVRCL CLPGYGGDLC DVGLRFCNPG WDAFQGACYK HFSTRRSWEE AETQCRMYGA 670 680 690 700 710 720 HLASISTPEE QDFINNRYRE YQWIGLNDRT IEGDFLWSDG VPLLYENWNP GQPDSYFLSG 730 740 750 760 770 780 ENCVVMVWHD QGQWSDVPCN YHLSYTCKMG LVSCGPPPEL PLAQVFGRPR LRYEVDTVLR 790 800 810 820 830 840 YRCREGLAQR NLPLIRCQEN GRWEAPQISC VPRRPARALH PEEDPEGRQG RLLGRWKALL 850 IPPSSPMPGP

References

[1]	"Homo sapiens protein coding cDNA." Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL BAD92807.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB209570 mRNA. Translation: BAD92807.1.
IPI	IPI00456623.
UniGene	Hs.516904.
3D structure databases
ProteinModelPortal	Q59F90.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOVERGEN	HBG008175.
Gene expression databases
ArrayExpress	Q59F90.
Bgee	Q59F90.
Family and domain databases
Gene3D	2.60.40.10. 1 hit. 3.10.100.10. 3 hits.
InterPro	IPR001304. C-type_lectin. IPR016186. C-type_lectin-like. IPR018378. C-type_lectin_CS. IPR016187. C-type_lectin_fold. IPR000742. EG-like_dom. IPR013032. EGF-like_CS. IPR007110. Ig-like_dom. IPR013783. Ig-like_fold. IPR003006. Ig/MHC_CS. IPR003599. Ig_sub. IPR013106. Ig_V-set. IPR000538. Link. IPR000436. Sushi_SCR_CCP. [Graphical view]
Pfam	PF00008. EGF. 1 hit. PF00059. Lectin_C. 1 hit. PF00084. Sushi. 1 hit. PF07686. V-set. 1 hit. PF00193. Xlink. 2 hits. [Graphical view]
PRINTS	PR01265. LINKMODULE.
SMART	SM00032. CCP. 1 hit. SM00034. CLECT. 1 hit. SM00181. EGF. 1 hit. SM00409. IG. 1 hit. SM00445. LINK. 2 hits. [Graphical view]
SUPFAM	SSF56436. C-type_lectin_fold. 3 hits. SSF57535. Complement_control_module. 1 hit.
PROSITE	PS00615. C_TYPE_LECTIN_1. 1 hit. PS50041. C_TYPE_LECTIN_2. 1 hit. PS00022. EGF_1. 1 hit. PS01186. EGF_2. 1 hit. PS50026. EGF_3. 1 hit. PS50835. IG_LIKE. 1 hit. PS00290. IG_MHC. 1 hit. PS01241. LINK_1. 2 hits. PS50963. LINK_2. 2 hits. PS50923. SUSHI. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q59F90_HUMAN

Accession

Primary (citable) accession number: Q59F90

Entry history

Integrated into UniProtKB/TrEMBL:	April 26, 2005
Last sequence update:	April 26, 2005
Last modified:	May 29, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.