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Q59F15

- Q59F15_HUMAN

UniProt

Q59F15 - Q59F15_HUMAN

Protein
Submitted name:

COL4A1 protein variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (26 Apr 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. extracellular matrix structural constituent Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    COL4A1 protein variantImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. collagen trimer Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiQ59F15.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000085652.
    HOVERGENiHBG004933.

    Family and domain databases

    Gene3Di2.170.240.10. 1 hit.
    InterProiIPR016187. C-type_lectin_fold.
    IPR008160. Collagen.
    IPR001442. Collagen_VI_NC.
    [Graphical view]
    PfamiPF01413. C4. 2 hits.
    PF01391. Collagen. 8 hits.
    [Graphical view]
    SMARTiSM00111. C4. 2 hits.
    [Graphical view]
    SUPFAMiSSF56436. SSF56436. 2 hits.
    PROSITEiPS51403. NC1_IV. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q59F15-1 [UniParc]FASTAAdd to Basket

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    YRRISGASRA TGTPGRNRFP RAARGQGLPG ITGQSGLPGL PGQQGAPGIP    50
    GFPGSKGEMG VMGTPGQPGS PGPVGAPGLP GEKGDHGFPG SSGPRGDPGL 100
    KGDKGDVGLP GKPGSMDKVD MGSMKGQKGD QGEKGQIGPI GEKGSRGDPG 150
    TPGVPGKDGQ AGQPGQPGPK GDPGISGTPG APGLPGPKGS VGGMGLPGTP 200
    GEKGVPGIPG PQGSPGLPGD KGAKGEKGQA GPPGIGIPGL RGEKGDQGIA 250
    GFPGSPGEKG EKGSIGIPGM PGSPGLKGSP GSVGYPGSPG LPGEKGDKGL 300
    PGLDGIPGVK GEAGLPGTPG PTGPAGQKGE PGSDGIPGSA GEKGEPGLPG 350
    RGFPGFPGAK GDKGSKGEVG FPGLAGSPGI PGSKGEQGFM GPPGPQGQPG 400
    LPGSPGHATE GPKGDRGPQG QPGLPGLPGP MGPPGLPGID GVKGDKGNPG 450
    WPGAPGVPGP KGDPGFQGMP GIGGSPGITG SKGDMGPPGV PGFQGPKGLP 500
    GLQGIKGDQG DHGVPGAKGL PGPPGPPGPY DIIKGEPGLP GPEGPPGLKG 550
    LQGLPGPKGQ QGVTGLVGIP GPPGIPGFDG APGQKGEMGP AGPTGPRGFP 600
    GPPGPDGLPG SMGPPGTPSV DHGFLVTRHS QTIDDPQCPS GTKILYHGYS 650
    LLYVQGNERA HGQDLGTAGS CLRKFSTMPF LFCNINNVCN FASRNDYSYW 700
    LSTPEPMPMS MAPITGENIR PFISRCAVCE APAMVMAVHS QTIQIPPCPS 750
    GWSSLWIGYS FVMHTSAGAE GSGQALASPG SCLEEFRSAP FIECHGRGTC 800
    NYYANAYSFW LATIERSEMF KKPTPSTLKA GELRTHVSRC QVCMRRT 847
    Length:847
    Mass (Da):82,979
    Last modified:April 26, 2005 - v1
    Checksum:i3083068BDE54461F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB209646 mRNA. Translation: BAD92883.1.
    UniGeneiHs.17441.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB209646 mRNA. Translation: BAD92883.1 .
    UniGenei Hs.17441.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q59F15.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOGENOMi HOG000085652.
    HOVERGENi HBG004933.

    Family and domain databases

    Gene3Di 2.170.240.10. 1 hit.
    InterProi IPR016187. C-type_lectin_fold.
    IPR008160. Collagen.
    IPR001442. Collagen_VI_NC.
    [Graphical view ]
    Pfami PF01413. C4. 2 hits.
    PF01391. Collagen. 8 hits.
    [Graphical view ]
    SMARTi SM00111. C4. 2 hits.
    [Graphical view ]
    SUPFAMi SSF56436. SSF56436. 2 hits.
    PROSITEi PS51403. NC1_IV. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Homo sapiens protein coding cDNA."
      Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
      Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: SpleenImported.

    Entry informationi

    Entry nameiQ59F15_HUMAN
    AccessioniPrimary (citable) accession number: Q59F15
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 26, 2005
    Last sequence update: April 26, 2005
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.