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Q59F15 (Q59F15_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
COL4A1 protein variant EMBL BAD92883.1
OrganismHomo sapiens (Human) EMBL BAD92883.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length847 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   DomainCollagen SAAS SAAS008160
   PTMDisulfide bond SAAS SAAS008160
Gene Ontology (GO)
   Cellular_componentcollagen

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionextracellular matrix structural constituent

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD92883.1

Sequences

Sequence LengthMass (Da)Tools
Q59F15 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: 3083068BDE54461F

FASTA84782,979
        10         20         30         40         50         60 
YRRISGASRA TGTPGRNRFP RAARGQGLPG ITGQSGLPGL PGQQGAPGIP GFPGSKGEMG 

        70         80         90        100        110        120 
VMGTPGQPGS PGPVGAPGLP GEKGDHGFPG SSGPRGDPGL KGDKGDVGLP GKPGSMDKVD 

       130        140        150        160        170        180 
MGSMKGQKGD QGEKGQIGPI GEKGSRGDPG TPGVPGKDGQ AGQPGQPGPK GDPGISGTPG 

       190        200        210        220        230        240 
APGLPGPKGS VGGMGLPGTP GEKGVPGIPG PQGSPGLPGD KGAKGEKGQA GPPGIGIPGL 

       250        260        270        280        290        300 
RGEKGDQGIA GFPGSPGEKG EKGSIGIPGM PGSPGLKGSP GSVGYPGSPG LPGEKGDKGL 

       310        320        330        340        350        360 
PGLDGIPGVK GEAGLPGTPG PTGPAGQKGE PGSDGIPGSA GEKGEPGLPG RGFPGFPGAK 

       370        380        390        400        410        420 
GDKGSKGEVG FPGLAGSPGI PGSKGEQGFM GPPGPQGQPG LPGSPGHATE GPKGDRGPQG 

       430        440        450        460        470        480 
QPGLPGLPGP MGPPGLPGID GVKGDKGNPG WPGAPGVPGP KGDPGFQGMP GIGGSPGITG 

       490        500        510        520        530        540 
SKGDMGPPGV PGFQGPKGLP GLQGIKGDQG DHGVPGAKGL PGPPGPPGPY DIIKGEPGLP 

       550        560        570        580        590        600 
GPEGPPGLKG LQGLPGPKGQ QGVTGLVGIP GPPGIPGFDG APGQKGEMGP AGPTGPRGFP 

       610        620        630        640        650        660 
GPPGPDGLPG SMGPPGTPSV DHGFLVTRHS QTIDDPQCPS GTKILYHGYS LLYVQGNERA 

       670        680        690        700        710        720 
HGQDLGTAGS CLRKFSTMPF LFCNINNVCN FASRNDYSYW LSTPEPMPMS MAPITGENIR 

       730        740        750        760        770        780 
PFISRCAVCE APAMVMAVHS QTIQIPPCPS GWSSLWIGYS FVMHTSAGAE GSGQALASPG 

       790        800        810        820        830        840 
SCLEEFRSAP FIECHGRGTC NYYANAYSFW LATIERSEMF KKPTPSTLKA GELRTHVSRC 


QVCMRRT

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References

[1]"Homo sapiens protein coding cDNA."
Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Spleen EMBL BAD92883.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB209646 mRNA. Translation: BAD92883.1.
IPIIPI00743696.
UniGeneHs.17441.

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ59F15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000085652.
HOVERGENHBG004933.

Gene expression databases

ArrayExpressQ59F15.

Family and domain databases

Gene3D2.170.240.10. 1 hit.
InterProIPR016187. C-type_lectin_fold.
IPR008160. Collagen.
IPR001442. Collagen_VI_NC.
[Graphical view]
PfamPF01413. C4. 2 hits.
PF01391. Collagen. 8 hits.
[Graphical view]
SMARTSM00111. C4. 2 hits.
[Graphical view]
SUPFAMSSF56436. C-type_lectin_fold. 2 hits.
PROSITEPS51403. NC1_IV. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ59F15_HUMAN
AccessionPrimary (citable) accession number: Q59F15
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: May 29, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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