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Protein
Submitted name:

COP9 constitutive photomorphogenic homolog subunit 2 variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
COP9 constitutive photomorphogenic homolog subunit 2 variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134952445.

PTM / Processingi

Proteomic databases

PaxDbiQ59EL2.
PRIDEiQ59EL2.

Expressioni

Gene expression databases

BgeeiENSG00000166200.
GenevisibleiQ59EL2. HS.

Interactioni

Protein-protein interaction databases

IntActiQ59EL2. 1 interactor.
MINTiMINT-4881053.
STRINGi9606.ENSP00000299259.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini353 – 435PCIInterPro annotationAdd BLAST83

Phylogenomic databases

eggNOGiKOG1464. Eukaryota.
COG5159. LUCA.
HOGENOMiHOG000194333.
HOVERGENiHBG003924.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
InterProiIPR000717. PCI_dom.
IPR011990. TPR-like_helical_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01399. PCI. 1 hit.
[Graphical view]
SMARTiSM00088. PINT. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF48452. SSF48452. 2 hits.

Sequencei

Sequence statusi: Fragment.

Q59EL2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KMSDMEDDFM CDDEEDYDLE YSEDSNSEPN VDLENQYYNS KALKEDDPKA
60 70 80 90 100
ALSSFQKVLE LEGEKGEWGF KALKQMIKIN FKLTNFPEMM NRYKQLLTYI
110 120 130 140 150
RSAVTRNYSE KSINSILDYI STSKQNSDFL CQMDLLQEFY ETTLEALKDA
160 170 180 190 200
KNDRLWFKTN TKLGKLYLER EEYGKLQKIL RQLHQSCQTD DGEDDLKKGT
210 220 230 240 250
QLLEIYALEI QMYTAQKNNK KLKALYEQSL HIKSAIPHPL IMGVIRECGG
260 270 280 290 300
KMHLREGEFE KAHTDFFEAF KNYDESGSPR RTTCLKYLVL ANMLMKSGIN
310 320 330 340 350
PFDSQEAKPY KNDPEILAMT NLVSAYQNND ITEFEKILKT NHSNIMDDPF
360 370 380 390 400
IREHIEELLR NIRTQVLIKL IKPYTRIHIP FISKELNIDV ADVESLLVQC
410 420 430 440 450
ILDNTIHGRI DQVNQLLELD HQKRGGARYT ALDKWTNQLN SLNQAVVSKL

A
Length:451
Mass (Da):52,533
Last modified:April 26, 2005 - v1
Checksum:i6797C8758E62B21A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209799 mRNA. Translation: BAD93036.1.
RefSeqiNP_001137359.1. NM_001143887.1.
UniGeneiHs.369614.

Genome annotation databases

GeneIDi9318.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209799 mRNA. Translation: BAD93036.1.
RefSeqiNP_001137359.1. NM_001143887.1.
UniGeneiHs.369614.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ59EL2. 1 interactor.
MINTiMINT-4881053.
STRINGi9606.ENSP00000299259.

Proteomic databases

PaxDbiQ59EL2.
PRIDEiQ59EL2.

Protocols and materials databases

DNASUi9318.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9318.

Organism-specific databases

CTDi9318.
PharmGKBiPA134952445.

Phylogenomic databases

eggNOGiKOG1464. Eukaryota.
COG5159. LUCA.
HOGENOMiHOG000194333.
HOVERGENiHBG003924.

Miscellaneous databases

GenomeRNAii9318.

Gene expression databases

BgeeiENSG00000166200.
GenevisibleiQ59EL2. HS.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
InterProiIPR000717. PCI_dom.
IPR011990. TPR-like_helical_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01399. PCI. 1 hit.
[Graphical view]
SMARTiSM00088. PINT. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF48452. SSF48452. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ59EL2_HUMAN
AccessioniPrimary (citable) accession number: Q59EL2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.