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Protein
Submitted name:

Nuclear RNA export factor 1 variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear RNA export factor 1 variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA31858.

PTM / Processingi

Proteomic databases

PaxDbiQ59E96.
PeptideAtlasiQ59E96.

Expressioni

Gene expression databases

BgeeiENSG00000162231.
GenevisibleiQ59E96. HS.

Interactioni

Protein-protein interaction databases

MINTiMINT-1446383.
STRINGi9606.ENSP00000294172.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini129 – 21183Tap-RNA_bindInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3763. Eukaryota.
ENOG410XR55. LUCA.
HOVERGENiHBG013199.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR012677. Nucleotide-bd_a/b_plait.
IPR030217. NXF_fam.
IPR015245. Tap_RNA-bd.
[Graphical view]
PANTHERiPTHR10662. PTHR10662. 1 hit.
PfamiPF09162. Tap-RNA_bind. 1 hit.
[Graphical view]
ProDomiPD043466. Tap_RNA_bd. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS51450. LRR. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q59E96-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RPAPEPALDL RCGMADEGKS YSEHDDERVN FPQRKKKGRG PFRWKYGEGN
60 70 80 90 100
RRSGRGGSGI RSSRLEEDDG DVAMSDAQDG PRVRYNPYTT RPNRRGDTWH
110 120 130 140 150
DRDRIHVTVR RDRAPPERGG AGTSQDGTSK NWFKITIPYG RKYDKAWLLS
160 170 180 190 200
MIQSKCSVPF TPIEFHYENT RAQFFVEDAS TASALKAVNY KILDRENRRI
210 220 230 240 250
SIIINSSAPP HTILNELKPE QVEQLKLIMS KRYDGSQQAL DLKGLRSDPD
260 270 280 290 300
LVAQNIDVVL NRRSCMAATL RIIEENIPEL LSLNLSNNRL YRLDDMSSIV
310 320 330 340 350
QKAPNLKILN LSGNELKSER ELDKIKGLKL EELWLDGNSL CDTFRDQSTY
360
IRSVVACVSP PGDLHPLGG
Length:369
Mass (Da):41,852
Last modified:April 26, 2005 - v1
Checksum:i22790CB637B60811
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209915 mRNA. Translation: BAD93152.1.
RefSeqiNP_001074960.1. NM_001081491.1.
UniGeneiHs.523739.
Hs.601546.

Genome annotation databases

GeneIDi10482.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209915 mRNA. Translation: BAD93152.1.
RefSeqiNP_001074960.1. NM_001081491.1.
UniGeneiHs.523739.
Hs.601546.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-1446383.
STRINGi9606.ENSP00000294172.

Proteomic databases

PaxDbiQ59E96.
PeptideAtlasiQ59E96.

Protocols and materials databases

DNASUi10482.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10482.

Organism-specific databases

CTDi10482.
PharmGKBiPA31858.

Phylogenomic databases

eggNOGiKOG3763. Eukaryota.
ENOG410XR55. LUCA.
HOVERGENiHBG013199.

Miscellaneous databases

GenomeRNAii10482.

Gene expression databases

BgeeiENSG00000162231.
GenevisibleiQ59E96. HS.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR012677. Nucleotide-bd_a/b_plait.
IPR030217. NXF_fam.
IPR015245. Tap_RNA-bd.
[Graphical view]
PANTHERiPTHR10662. PTHR10662. 1 hit.
PfamiPF09162. Tap-RNA_bind. 1 hit.
[Graphical view]
ProDomiPD043466. Tap_RNA_bd. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS51450. LRR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ59E96_HUMAN
AccessioniPrimary (citable) accession number: Q59E96
Entry historyi
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: September 7, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.