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Q59E16 (Q59E16_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1099 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q59E16 [UniParc].

Last modified June 26, 2013. Version 2.
Checksum: 80AA3EF3AB03EF6C

FASTA1,099124,696
        10         20         30         40         50         60 
MDWLLATPQL YSAFSSLGCL EGDTYVVNPN ALAILEEINY KLTYEDQTLR TFRRAIGFGQ 

        70         80         90        100        110        120 
NVRSDLIPLL ENAKDDAVLE SVIRILVNLT VPVECLFSVD VMYRTDVGRH TIFELNKLLY 

       130        140        150        160        170        180 
TSKEAFTEAR STKSVVEYMK HILESDPKLS PHKCDQINNC LLLLRNILHI PETHAHCVMP 

       190        200        210        220        230        240 
MMQSMPHGIS MQNTILWNLF IQSIDKLLLY LMTCPQRAFW GVTMVQLIAL IYKDQHGSGD 

       250        260        270        280        290        300 
SSPMLTSDPT SDSSDNGSNG RGMGGGMREG TAATLQEVSR KGQEYQNAMA RVPADKPDGS 

       310        320        330        340        350        360 
EEASDMTGND SEQPGSPEQS QPAGESMDDG DYEDQRHRQL NEHGEEDEDE DEVEEEEYLQ 

       370        380        390        400        410        420 
LGPASEPLNL TQQPADKVNN TTNPTSSAPQ GCLGNEPFKP PPPLPVRAST SAHAQMQKFN 

       430        440        450        460        470        480 
ESSYASHVSA VKLGQKSPHA GQLQLTKGKC CPQKRECPSS QSELSDCGYG TQVENQESIS 

       490        500        510        520        530        540 
TSSNDDDGPQ GKPQHQKPPC NTKPRNKPRT IMSPMDKKEL RRKKLVKRSK SSLINMKGLV 

       550        560        570        580        590        600 
QHTPTDDDIS NLLKEFTVDF LLKGYSYLVE ELHMQLLSNA KVPIDTSHFF WLVTYFLKFA 

       610        620        630        640        650        660 
AQLELDMEHI DTILTYDVLS YLTYEGVSLC EQLELNARQE GSDLKPYLRR MHLVVTAIRE 

       670        680        690        700        710        720 
FLQAIDTYNK VTHLNEDDKA HLRQLQLQIS EMSDLRCLFV LLLRRFNPSI HSKQYLQDLV 

       730        740        750        760        770        780 
VTNHILLLIL DSSAKLGGCQ TIRLSEHITQ FATLEVMHYY GILLEDFNNN GEFVNDCIFT 

       790        800        810        820        830        840 
MMHHIGGDLG QIGVLFQPII LKTYSRIWEA DYELCDDWSD LIEYVIHKFM NTPPKSPLTI 

       850        860        870        880        890        900 
PTTSLTEMTK EHNQEHTVCS WSQEEMDTLY WYYVQSKKNN DIVGKIVKLF SNNGNKLKTR 

       910        920        930        940        950        960 
ISIIQQLLQQ DIITLLEYDD LMKFEDAEYQ RTLLTTPTSA TTESGIEIKE CAYGKPSDDV 

       970        980        990       1000       1010       1020 
QILLDLIIKE NKAQHLLWLQ RILIECCFVK LTLRSGLKVP EGDHIMEPVA YHCICKQKSI 

      1030       1040       1050       1060       1070       1080 
PVVQWNNEQS TTMLYQPFVL LLHKLGIQLP ADAGSIFARI PDYWTPETMY GLAKKLGPLD 

      1090 
KRELKSTTEK NNPFVIPQR 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence."
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., Pacleb J.M., Park S. expand/collapse author list , Pfeiffer B.D., Richards S., Sodergren E.J., Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C., Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[4]"The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[5]"Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[6]"Combined evidence annotation of transposable elements in genome sequences."
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[7]"The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
Smith C.D., Shu S., Mungall C.J., Karpen G.H.
Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[8]"Sequence finishing and mapping of Drosophila melanogaster heterochromatin."
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., Dimitri P., Karpen G.H., Celniker S.E.
Science 316:1625-1628(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014134 Genomic DNA. Translation: AAX52649.2.
RefSeqNP_001014463.2. NM_001014463.3.
UniGeneDm.2663.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ59E16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID33571.
KEGGdme:Dmel_CG3234.
UCSCCG3234-RE. d. melanogaster.

Organism-specific databases

CTD107698.
FlyBaseFBgn0014396. tim.

Phylogenomic databases

KOK12074.

Family and domain databases

InterProIPR006906. Timeless.
[Graphical view]
PfamPF04821. TIMELESS. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSARHGEF5. drosophila.
GenomeRNAi33571.
NextBio784249.

Entry information

Entry nameQ59E16_DROME
AccessionPrimary (citable) accession number: Q59E16
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: June 26, 2013
Last modified: April 16, 2014
This is version 59 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)