Endo-1,4-beta-xylanase precursor - Streptomyces sp. S38

Preferred order of sections

Names and origin

Protein names

Recommended name:
Endo-1,4-beta-xylanase RuleBase RU004392
EC=3.2.1.8 RuleBase RU004392

Gene names

Name:

xyl1 EMBL CAA67143.1

Organism

Streptomyces sp. S38 EMBL CAA67143.1

Taxonomic identifier

181109 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	228 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Catalytic activity	Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392
Pathway	Glycan degradation; xylan degradation. RuleBase RU004392
Sequence similarities	Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433 EMBL CAA67143.1
Domain	Signal EMBL CAA67143.1
Molecular function	Glycosidase RuleBase RU003433 EMBL CAA67143.1 Hydrolase
Technical term	3D-structure PDB 1HIX
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

1 – 39

39

Potential EMBL CAA67143.1

Chain

39 – 228

190

endo-1,4-beta-xylanase EMBL CAA67143.1

PRO_5000146888

Chain

40 – 228

189

Potential EMBL CAA67143.1

PRO_5000146887

Sequences

Sequence

Length

Mass (Da)

Tools

Q59962 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: EAA15233052E74AA
Show »

FASTA

228

24,493

        10         20         30         40         50         60 
MTKDNTPIRP VSRRGFIGRA GALALATSGL MLPGTARADT VITTNQTGTN NGYYYSFWTD 

        70         80         90        100        110        120 
GGGSVSMNLA SGGSYGTSWT NCGNFVAGKG WANGARRTVN YSGSFNPSGN AYLTLYGWTA 

       130        140        150        160        170        180 
NPLVEYYIVD NWGTYRPTGT YKGTVTSDGG TYDVYQTTRV NAPSVEGTKT FNQYWSVRQS 

       190        200        210        220 
KRTGGSITAG NHFDAWARYG MPLGSFNYYM IMATEGYQSS GSSSISVS

« Hide

References

[1]	"Sequence, overproduction and purification of the family 11 endo-beta-1,4-xylanase encoded by the xyl1 gene of Streptomyces sp. S38." Georis J., Giannotta F., Lamotte-Brasseur J., Devreese B., Van Beeumen J., Granier B., Frere J.M. Gene 237:123-133(1999) [PubMed: 10524243] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: S38 EMBL CAA67143.1.
[2]	"Crystallographic analysis of family 11 endo-beta-1,4-xylanase Xyl1 from Streptomyces sp. S38." Wouters J., Georis J., Engher D., Vandenhaute J., Dusart J., Frere J.M., Depiereux E., Charlier P. Acta Crystallogr. D Biol. Crystallogr. 57:1813-1819(2001) [PubMed: 11717493] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 39-228.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

X98518 Genomic DNA. Translation: CAA67143.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1HIX	X-ray	2.00	A/B	39-228	[»]

ProteinModelPortal

Q59962.

SMR

Q59962. Positions 42-225.

ModBase

Search...

Protein family/group databases

CAZy

GH11. Glycoside Hydrolase Family 11.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR008985. ConA-like_lec_gl.
IPR001137. Glyco_hydro_11.
IPR013319. Glyco_hydro_11/12_cat.
IPR018208. Glyco_hydro_11_AS.
IPR006311. TAT_signal.
[Graphical view]

Gene3D

G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.

Pfam

PF00457. Glyco_hydro_11. 1 hit.
[Graphical view]

PRINTS

PR00911. GLHYDRLASE11.

SUPFAM

SSF49899. ConA_like_lec_gl. 1 hit.

PROSITE

PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit.
PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q59962_9ACTO

Accession

Primary (citable) accession number: Q59962

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	May 31, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)