Q59922 (Q59922_STRHA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xys1 EMBL AAC45554.1
EC=3.2.1.8 EMBL AAC45554.1

Gene names

Name:

xysA EMBL AAC45554.1

Organism

Streptomyces halstedii EMBL AAC45554.1

Taxonomic identifier

1944 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU003432 EMBL AAC45554.1 Hydrolase
Technical term	3D-structure PDB 1NQ6
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC polysaccharide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q59922 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 086A7EE6B7C78341	FASTA	461	47,930
	10 20 30 40 50 60 MAQNPPVGGR TRRRPQARAR CALSLLTAGV LAAAGVVALA GTAQAAGALG DAAAAKGRYF 70 80 90 100 110 120 GAAVAANHLG EAAYASTLDA QFGSVTPENE MKWDAVESSR NSFSFSAADR IVSHAQSKGM 130 140 150 160 170 180 KVRGHTLVWH SQLPGWVSPL AATDLRSAMN NHITQVMTHY KGKIHSWDVV NEAFQDGGSG 190 200 210 220 230 240 ARRSSPFQDK LGNGFIEEAF RTARTVDADA KLCYNDYNTD GQNAKSNAVY EMVKDFKQRG 250 260 270 280 290 300 VPIDCVGFQS HFNSNSPVPS DFQANLQRFA DLGVDVQITE LDIEGSGSAQ AANYTKVVNA 310 320 330 340 350 360 CLAVTRCTGI TVWGVTDKYS WRSGGTPLLF DGDYNKKPAY DAVLAALGGS GGGGDDGGEG 370 380 390 400 410 420 GDGACTATYT RTSTWNGGYN GQVTVKAGGS GITGWAVPVT VASPQKVSAV WNGTPTTTGD 430 440 450 460 VMTVRHSWNG TLAAGASTTF GFTVQTNGGT SAPVVGACTA S

References

[1]	"Analysis of xysA, a gene from Streptomyces halstedii JM8 that encodes a 45-kilodalton modular xylanase, Xys1." Ruiz-Arribas A., Sanchez P., Calvete J.J., Raida M., Fernandez-Abalos J.M., Santamaria R.I. Appl. Environ. Microbiol. 63:2983-2988(1997) [PubMed: 9251186] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: JM8 EMBL AAC45554.1.
[2]	Santamaria-Sanchez R.I., Ruiz-Arribas A., Fernandez-Abalos J.M., Sanchez P., Garda-Salas A.L. Submitted (NOV-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: JM8 EMBL AAC45554.1.
[3]	"Structure of xylanase Xys1delta from Streptomyces halstedii." Canals A., Vega M.C., Gomis-Ruth F.X., Diaz M., Santamaria R R.I., Coll M. Acta Crystallogr. D Biol. Crystallogr. 59:1447-1453(2003) [PubMed: 12876348] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS) OF 46-347.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

U41627 Genomic DNA. Translation: AAC45554.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1NQ6	X-ray	1.78	A	46-347	[»]

ProteinModelPortal

Q59922.

SMR

Q59922. Positions 58-347.

ModBase

Search...

Protein family/group databases

CAZy

CBM2. Carbohydrate-Binding Module Family 2.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR018366. CBM2_CS.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

Pfam

PF00553. CBM_2. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]

PRINTS

PR00134. GLHYDRLASE10.

SMART

SM00637. CBD_II. 1 hit.
SM00633. Glyco_10. 1 hit.
[Graphical view]

SUPFAM

SSF49384. Cellul_bind. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.

PROSITE

PS51173. CBM2. 1 hit.
PS00561. CBM2_A. 1 hit.
PS00591. GLYCOSYL_HYDROL_F10. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q59922_STRHA

Accession

Primary (citable) accession number: Q59922

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	January 25, 2012
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)