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Protein

RNA polymerase sigma factor

Gene
N/A
Organism
Streptomyces coelicolor
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation, Sigma factorUniRule annotationSAAS annotation
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase sigma factorUniRule annotation
OrganismiStreptomyces coelicolorImported
Taxonomic identifieri1902 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group

Structurei

3D structure databases

ProteinModelPortaliQ59836
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 68RNA_pol_sigma70InterPro annotationAdd BLAST14
Domaini223 – 249RNA_pol_sigma70InterPro annotationAdd BLAST27

Sequence similaritiesi

Belongs to the sigma-70 factor family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105DN4 Bacteria
COG1191 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR014284 RNA_pol_sigma-70_dom
IPR000943 RNA_pol_sigma70
IPR007627 RNA_pol_sigma70_r2
IPR007624 RNA_pol_sigma70_r3
IPR007630 RNA_pol_sigma70_r4
IPR012845 RNA_pol_sigma_FliA_WhiG
IPR013325 RNA_pol_sigma_r2
IPR013324 RNA_pol_sigma_r3/r4-like
PfamiView protein in Pfam
PF04542 Sigma70_r2, 1 hit
PF04539 Sigma70_r3, 1 hit
PF04545 Sigma70_r4, 1 hit
PIRSFiPIRSF000770 RNA_pol_sigma-SigE/K, 1 hit
PRINTSiPR00046 SIGMA70FCT
SUPFAMiSSF88659 SSF88659, 2 hits
SSF88946 SSF88946, 1 hit
TIGRFAMsiTIGR02479 FliA_WhiG, 1 hit
TIGR02937 sigma70-ECF, 1 hit
PROSITEiView protein in PROSITE
PS00715 SIGMA70_1, 1 hit
PS00716 SIGMA70_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q59836-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPPAPSTLD ELWRSYKTTG DERLREQLIL HYSPLVKYVA GRVSVGLPPN
60 70 80 90 100
VEQADFVSSG VFGLIDAIEK FDVDREIKFE TYAITRIRGA MIDELRALDW
110 120 130 140 150
IPRSVRQKAR NVERAYATLE ARLRRTPSES EVAVEMGIAV EDLHAVFSQL
160 170 180 190 200
SLANVVALEE LLHAGGEGGG RLSLMDTLED TAADNPVEVA EDRELRRLLA
210 220 230 240 250
RAINTLPERE KTVVTLYYYE GLTLAEIGNV LGVTESRVSQ IHTKSVLQLR

AKLAGFGR
Length:258
Mass (Da):28,788
Last modified:November 1, 1996 - v1
Checksum:iD24A5E4A20569017
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J03169 Genomic DNA Translation: AAA26829.1

Similar proteinsi

Entry informationi

Entry nameiQ59836_STRCH
AccessioniPrimary (citable) accession number: Q59836
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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