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Protein
Submitted name:

Diol dehydrase alpha subunit

Gene

pddA

Organism
Klebsiella oxytoca
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Cofactori

adenosylcob(III)alaminUniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sitei143Important for catalytic activityCombined sources1
Metal bindingi170CalciumCombined sources1
Sitei170Important for catalytic activityCombined sources1
Metal bindingi221CalciumCombined sources1
Metal bindingi296CalciumCombined sources1
Sitei296Important for catalytic activityCombined sources1
Sitei335Important for catalytic activityCombined sources1
Metal bindingi362Calcium; via carbonyl oxygenCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationImported
LigandCalciumCombined sources, CobalaminUniRule annotation, Cobalt, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDAi4.2.1.28 2811

Names & Taxonomyi

Protein namesi
Submitted name:
Diol dehydrase alpha subunitImported
Submitted name:
Propanediol dehydrataseImported
Submitted name:
Propanediol dehydratase large subunitImported (EC:4.2.1.28Imported)
Gene namesi
Name:pddAImported
Synonyms:pduCImported
ORF Names:AB185_12495Imported, C2U42_33605Imported, C2U44_05475Imported, CPZ29_20480Imported, SAMEA2273575_05741Imported
OrganismiKlebsiella oxytocaImported
Taxonomic identifieri571 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeKlebsiella
Proteomesi
  • UP000035545 Componenti: Chromosome
  • UP000236461 Componenti: Chromosome
  • UP000236441 Componenti: Chromosome
  • UP000229935 Componenti: Unassembled WGS sequence
  • UP000077674 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1DIOX-ray2.20A/L1-554[»]
1EEXX-ray1.70A/L1-554[»]
1EGMX-ray1.85A/L1-554[»]
1EGVX-ray1.75A/L1-554[»]
1IWBX-ray1.85A/L1-554[»]
1UC4X-ray1.80A/L1-554[»]
1UC5X-ray2.30A/L1-554[»]
3AUJX-ray2.10A/L1-554[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 551Dehydratase_LUInterPro annotationAdd BLAST551

Sequence similaritiesi

Belongs to the diol/glycerol dehydratase large subunit family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DMB Bacteria
COG4909 LUCA
KOiK01699

Family and domain databases

CDDicd03687 Dehydratase_LU, 1 hit
Gene3Di3.20.20.3501 hit
InterProiView protein in InterPro
IPR016176 Cbl-dep_enz_cat
IPR036999 Diol/glycerol_deHase_lsu_sf
IPR003206 Diol/glycerol_deHydtase_lsu
PfamiView protein in Pfam
PF02286 Dehydratase_LU, 1 hit
PIRSFiPIRSF018507 Prpndl_dhdrts_lg, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD025428 Diol/glycerol_deHydtase_lsu, 1 hit
SUPFAMiSSF51703 SSF51703, 1 hit

Sequencei

Sequence statusi: Complete.

Q59470-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSKRFEALA KRPVNQDGFV KEWIEEGFIA MESPNDPKPS IKIVNGAVTE
60 70 80 90 100
LDGKPVSDFD LIDHFIARYG INLNRAEEVM AMDSVKLANM LCDPNVKRSE
110 120 130 140 150
IVPLTTAMTP AKIVEVVSHM NVVEMMMAMQ KMRARRTPSQ QAHVTNVKDN
160 170 180 190 200
PVQIAADAAE GAWRGFDEQE TTVAVARYAP FNAIALLVGS QVGRPGVLTQ
210 220 230 240 250
CSLEEATELK LGMLGHTCYA ETISVYGTEP VFTDGDDTPW SKGFLASSYA
260 270 280 290 300
SRGLKMRFTS GSGSEVQMGY AEGKSMLYLE ARCIYITKAA GVQGLQNGSV
310 320 330 340 350
SCIGVPSAVP SGIRAVLAEN LICSSLDLEC ASSNDQTFTH SDMRRTARLL
360 370 380 390 400
MQFLPGTDFI SSGYSAVPNY DNMFAGSNED AEDFDDYNVI QRDLKVDGGL
410 420 430 440 450
RPVREEDVIA IRNKAARALQ AVFAGMGLPP ITDEEVEAAT YAHGSKDMPE
460 470 480 490 500
RNIVEDIKFA QEIINKNRNG LEVVKALAQG GFTDVAQDML NIQKAKLTGD
510 520 530 540 550
YLHTSAIIVG DGQVLSAVND VNDYAGPATG YRLQGERWEE IKNIPGALDP

NEID
Length:554
Mass (Da):60,348
Last modified:November 1, 1996 - v1
Checksum:i5AC48A035B65331D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JQ478430 Genomic DNA Translation: AFJ04717.1
CP011636 Genomic DNA Translation: AKL34672.1
CP026269 Genomic DNA Translation: AUV90571.1
CP026285 Genomic DNA Translation: AUW13819.1
D45071 Genomic DNA Translation: BAA08099.1
PCMV01000015 Genomic DNA Translation: PDO72239.1
FKYU01000047 Genomic DNA Translation: SAQ16019.1
PIRiA56111
RefSeqiWP_004105132.1, NZ_PDLB01000004.1

Genome annotation databases

EnsemblBacteriaiAKL34672; AKL34672; AB185_12495
SAQ16019; SAQ16019; SAMEA2273575_05741
GeneIDi29381772
KEGGikoc:AB185_12495
PATRICifig|571.108.peg.4696

Similar proteinsi

Entry informationi

Entry nameiQ59470_KLEOX
AccessioniPrimary (citable) accession number: Q59470
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported