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Q59420 (Q59420_ERWCH) Unreviewed, UniProtKB/TrEMBL

Last modified November 2, 2010. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL CAA10642.1
EC=4.2.2.2 EMBL CAA10642.1
Gene names
Name:pelC EMBL CAA10642.1
OrganismErwinia chrysanthemi EMBL CAA10642.1
Taxonomic identifier556 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAA10642.1
   Molecular functionLyase EMBL CAA10642.1
Gene Ontology (GO)
   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL CAA10642.1
Chain23 – 374352pectate lyase EMBL CAA10642.1
PRO_5000064784
Chain24 – 374351 Potential EMBL CAA10642.1
PRO_5000064783

Sequences

Sequence LengthMass (Da)Tools
Q59420 [UniParc].

Last modified August 1, 1999. Version 2.
Checksum: 0086E71012E13FD4

FASTA37439,891
        10         20         30         40         50         60 
MKSFIAPIAA GLLLAFSQSS LAATGGYATT SGGNVTGAVS KTAASMQDII DIIDAAKVDS 

        70         80         90        100        110        120 
KGKKVKGGAY PLVITYTGNE DSLINAAAAN ICGQWSKDAR GVEIKDFTKG ITIIGANGSS 

       130        140        150        160        170        180 
ANFGLWIVNS SDVVVRNMRI GYLPGGAQDG DMFRIDNSPN VWLDHNELFA ANHECDGTKD 

       190        200        210        220        230        240 
GDTTFESAFD IKKGATYVTI SYNNIHGVKK VGLAGFSSSD SAERNITYHH NIYNDVNARL 

       250        260        270        280        290        300 
PLQRGGNVHA YNNLYTNITS SGLNVRQNGK ALIENNWFEN AVNPVTSRYD GSNFGTWVLK 

       310        320        330        340        350        360 
NNNITKPADF ATYNITWTAD TKAYVNADSW TSTGTYPAVT YSYSPVSAQC VKDKLASYAG 

       370 
VGKNLAELTS AACK

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References

[1]Hugouvieux-Cotte-Pattat N.
Submitted (JAN-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3937 EMBL CAA10642.1.
[2]"Analysis of the regulation of the pelBC genes in Erwinia chrysanthemi 3937."
Hugouvieux-Cotte-Pattat N., Robert-Baudouy J.
Mol. Microbiol. 6:2363-2376(1992) [PubMed: 1406275] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ132325 Genomic DNA. Translation: CAA10642.1.
PIRS25263.

3D structure databases

HSSPHSSP built from PDB template 1AIR based on UniProtKB P11073.
ProteinModelPortalQ59420.
ModBaseSearch...

Protein family/group databases

CAZyPL1. Polysaccharide Lyase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR002022. Amb_allergen.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF00544. Pec_lyase_C. 1 hit.
[Graphical view]
SMARTSM00656. Amb_all. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ59420_ERWCH
AccessionPrimary (citable) accession number: Q59420
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: August 1, 1999
Last modified: November 2, 2010
This is version 40 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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