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Protein
Submitted name:

Endo-1,3(4)-beta-glucanase

Gene

licA

Organism
Clostridium thermocellum (Ruminiclostridium thermocellum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BRENDAi3.2.1.39. 1530.
3.2.1.6. 1530.

Protein family/group databases

CAZyiCBM4. Carbohydrate-Binding Module Family 4.
CBM54. Carbohydrate-Binding Module Family 54.
GH16. Glycoside Hydrolase Family 16.

Names & Taxonomyi

Protein namesi
Submitted name:
Endo-1,3(4)-beta-glucanaseImported (EC:3.2.1.6Imported)
Gene namesi
Name:licAImported
OrganismiClostridium thermocellum (Ruminiclostridium thermocellum)Imported
Taxonomic identifieri1515 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence analysisAdd
BLAST
Chaini27 – 13211295Sequence analysisPRO_5007704739Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi203119.Cthe_2809.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 8864SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini89 – 14557SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini146 – 20964SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini409 – 673265GH16 (glycosyl hydrolase family 16)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG41090B1. Bacteria.
COG2273. LUCA.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 4 hits.
InterProiIPR003305. CenC_carb-bd.
IPR013320. ConA-like_dom.
IPR008979. Galactose-bd-like.
IPR000757. GH16.
IPR001119. SLH_dom.
[Graphical view]
PfamiPF02018. CBM_4_9. 4 hits.
PF00722. Glyco_hydro_16. 1 hit.
PF00395. SLH. 3 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 4 hits.
SSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
PS51272. SLH. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q59328-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKRLLSSVL IIMLLLSAWS PISVQASDGI NDIRGHWAEE DLNKWMEKGI
60 70 80 90 100
LVGYQDGTIR PDNNITRAEF VTLINKVFGL YELSREQFAD VEDSKWYSRE
110 120 130 140 150
ILKARAAGYI AGYGSNVFKP DNYITRQEAV VIIAKVFELQ SGSNYTSKFK
160 170 180 190 200
DGSLVKEYAK DSVSALVEKG YIAGYEDGTF RPDNYITRAE TIKILNKIIP
210 220 230 240 250
SLYNEKGDYK NEEVAGNALI NTEGVILKDT VINGDLYLAQ GIQNGDVTLD
260 270 280 290 300
GVNVKGTVFV NGGGSDSIHF INTKINRVVV NKTGVRIVTS GNTSVESVVV
310 320 330 340 350
KSGAKLEEKE LTGDGFKNVT VDSQLSAGNE IIFVGDFEQV DVLADDALLE
360 370 380 390 400
TKEAKMKLRI FGQRIKVNGK AIEKSSKNYI VNGELISTEE EPGPSDAPGA
410 420 430 440 450
EDDQNSGSPG SSTNPAPTKN PNEEWRLVWS DEFNGSEINM ANWSYDDPTN
460 470 480 490 500
GRWNGEVQSY TQNNAYIKDG ALVIEARKED ITEPSGETYH YTSSKLITKG
510 520 530 540 550
KKSWKYGKFE IRAKMPQGQG IWPAIWMMPE DEPFYGTWPK CGEIDIMELL
560 570 580 590 600
GHEPDKIYGT IHFGEPHKES QGTYTLPEGQ TFADDFHVYS IEWEPGEIRW
610 620 630 640 650
YIDGKLYHVA NDWYSRDPYL ADDYTYPAPF DQNFFLILNI SVGGGWPGYP
660 670 680 690 700
DETTVFPQQM VVDYVRVYQK DKYPHREKPA KEEVKPREPL EDGNYIYNGG
710 720 730 740 750
FDVDDSAAVG VDGVPYTSYW TFLTASGGAA TVNVEEGVMH VQIENGGTTD
760 770 780 790 800
YGVQLLQAPI HLEKGAKYKA SFDMKAENPR QVKLKIGGDG DRGWKDYAAI
810 820 830 840 850
PPFTVSTEMT NYEFEFTMKD DTDVKARFEF NMGLDDNDVW IDNVKLIKTE
860 870 880 890 900
DAPVIDPSEI ARPPLLSGNY IYNGTFDQGP NRMGFWNFVV DSTAKATYYI
910 920 930 940 950
GSDVNERRFE TRIEKGGTSR GAIRLVQPGI NIENGKTYKV SFEASAANTR
960 970 980 990 1000
TIEVEIASNL HNSSIFATTF EISKESKIYE FEFTMDKDSD KNGELRFNLG
1010 1020 1030 1040 1050
GSNVNVYIDN VVMKRVSTDE VEGNLILNGV FNGLAGWGYG GYEPGSADFE
1060 1070 1080 1090 1100
SHEEQFRAII SSVGNEGWNV QLYQDNVPLE QGQTYEVSFD AKSTIDRKII
1110 1120 1130 1140 1150
VQLQRNGTSD NNWDSYFYQE VELTNELKTF KYEFTMSKPT DSASRFNFAL
1160 1170 1180 1190 1200
GNTENKTYAP HEIIIDNVVV RKVATPSALI LNGTFDDGMD HWLLYWGDGE
1210 1220 1230 1240 1250
GNCDVTDGEL EINITKVGTA DYMPQIKQEN IALQEGVTYT LSLKARALEA
1260 1270 1280 1290 1300
RSIKVDILDS SYNWYGGTIF DLTTEDAVYT FTFTQSKSIN NGVLTINLGT
1310 1320
IEGKTSAATT VYLDDILLEQ Q
Length:1,321
Mass (Da):147,773
Last modified:June 1, 2002 - v2
Checksum:iA45213FF99748F0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X89732 Genomic DNA. Translation: CAA61884.2.
AJ307315 Genomic DNA. Translation: CAC27412.2.
PIRiT18265.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X89732 Genomic DNA. Translation: CAA61884.2.
AJ307315 Genomic DNA. Translation: CAC27412.2.
PIRiT18265.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi203119.Cthe_2809.

Protein family/group databases

CAZyiCBM4. Carbohydrate-Binding Module Family 4.
CBM54. Carbohydrate-Binding Module Family 54.
GH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG41090B1. Bacteria.
COG2273. LUCA.

Enzyme and pathway databases

BRENDAi3.2.1.39. 1530.
3.2.1.6. 1530.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 4 hits.
InterProiIPR003305. CenC_carb-bd.
IPR013320. ConA-like_dom.
IPR008979. Galactose-bd-like.
IPR000757. GH16.
IPR001119. SLH_dom.
[Graphical view]
PfamiPF02018. CBM_4_9. 4 hits.
PF00722. Glyco_hydro_16. 1 hit.
PF00395. SLH. 3 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 4 hits.
SSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
PS51272. SLH. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ59328_CLOTM
AccessioniPrimary (citable) accession number: Q59328
Secondary accession number(s): Q9AL34
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 2002
Last modified: July 6, 2016
This is version 77 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.