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Protein

Beta-xylanase

Gene
N/A
Organism
Cellvibrio mixtus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM15. Carbohydrate-Binding Module Family 15.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
OrganismiCellvibrio mixtusImported
Taxonomic identifieri39650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaCellvibrionalesCellvibrionaceaeCellvibrio

Structurei

3D structure databases

ProteinModelPortaliQ59301.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini101 – 249149CBM15 (carbohydrate binding type-15)InterPro annotationAdd
BLAST
Domaini265 – 614350GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR005088. CBM_fam15.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF03426. CBM_15. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51759. CBM15. 1 hit.
PS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q59301-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQQVHQFLSI GLFTLVLSAC GGSGGGDNNN SSANNSSANT SATNSSSSAP
60 70 80 90 100
ASIAASSVEP SSTPASSIAS EAASSIAPSS VAASSEPASS SAPASSSSAA
110 120 130 140 150
SATVLTLDMT SGWRGNGTGN SGVTLNSDGV SFTASGDNIG AVTDMLKPIQ
160 170 180 190 200
LEDAIITMVV NVSSEFKASG ASLQPIVQIK GGSYPGEWGC WAGNELFTAG
210 220 230 240 250
EDATISCTVT EGDKKFNQTE FDVQVGVQAK GTPTGVVTIK SVTVTLAPAA
260 270 280 290 300
SSSSAQSSST GSVYSANVTR LQALAAFPIG AAVTNNDGPS FNIVTNTSEQ
310 320 330 340 350
AVVEKHFGEM TAGNIMKMSY LQPSNGNFTF TNADTFVDYA KDNNINVHGH
360 370 380 390 400
ALVWHSDYQV PNFMKNWSGS AADFIAEVED HVTQVVTHFK AKGNVVSWDV
410 420 430 440 450
VNEAINDGSP VANFRTTDST FYVKSGNSSI YIEKAFQAAR AADPSAILYY
460 470 480 490 500
NDYNIDQNNA KTTKMIEMLT DFQTRSIPID GVGFQMHVFM DYPSIASISA
510 520 530 540 550
AMKKVVDKGL KVKITELDVA VNNPYSGGWP GNKITSFTNT VALAQKKRYC
560 570 580 590 600
EIVKAYMDTV PAAQRGGISV WGTTDANTWL TTATAAYNGE AIAWPLLFDN
610 620
NYNDKPALRG FADGLEGTAC N
Length:621
Mass (Da):64,930
Last modified:November 1, 1996 - v1
Checksum:i830E5B959D2C3AB8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48926 Genomic DNA. Translation: CAA88762.1.
PIRiS59632.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48926 Genomic DNA. Translation: CAA88762.1.
PIRiS59632.

3D structure databases

ProteinModelPortaliQ59301.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM15. Carbohydrate-Binding Module Family 15.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR005088. CBM_fam15.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF03426. CBM_15. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51759. CBM15. 1 hit.
PS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ59301_9GAMM
AccessioniPrimary (citable) accession number: Q59301
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.