Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase

Gene

Amy

Organism
Bacillus sp. TS-23
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.2.1Imported)
Gene namesi
Name:AmyImported
OrganismiBacillus sp. TS-23Imported
Taxonomic identifieri38441 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2519HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ59222.
SMRiQ59222. Positions 33-514.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini510 – 612103CBM20 (carbohydrate binding type-20)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q59222-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNVKKVWLY YSIIATLVIS FFTPFSTAQA NTAPINETMM QYFEWDLPND
60 70 80 90 100
GTLWTKVKNE AANLSSLGIT ALWLPPAYKG TSQSDVGYGV YDLYDLGEFN
110 120 130 140 150
QKGTIRTKYG TKTQYIQAIQ AAKAAGMQVY ADVVFNHKAG ADGTEFVDAV
160 170 180 190 200
EVDPSNRNQE TSGTYQIQAW TKFDFPGRGN TYSSFKWRWY HFDGTDWDES
210 220 230 240 250
RKLNRIYKFR STGKAWDWEV DTENGNYDYL MFADLDMDHP EVVTELKNWG
260 270 280 290 300
TWYVNTTNID GFRLDAVKHI KYSFFPDWLT YVRNQTGKNL FAVGEFWSYD
310 320 330 340 350
VNKLHNYITK TNGSMSLFDA PLHNNFYTAS KSSGYFDMRY LLNNTLMKDQ
360 370 380 390 400
PSLAVTLVDN HDTQPGQSLQ SWVEPWFKPL AYAFILTRQE GYPCVFYGDY
410 420 430 440 450
YGIPKYNIPG LKSKIDPLLI ARRDYAYGTQ RDYIDHQDII GWTREGIDTK
460 470 480 490 500
PNSGLAALIT DGPGGSKWMY VGKKHAGKVF YDLTGNRSDT VTINADGWGE
510 520 530 540 550
FKVNGGSVSI WVAKTSNVTF TVNNATTTSG QNVYVVANIP ELGNWNTANA
560 570 580 590 600
IKMNPSSYPT WKATIALPQG KAIEFKFIKK DQAGNVIWES TSNRTYTVPF
610
SSTGSYTASW NVP
Length:613
Mass (Da):69,537
Last modified:November 1, 1996 - v1
Checksum:i14684A30FC2895E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22045 Genomic DNA. Translation: AAA63900.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22045 Genomic DNA. Translation: AAA63900.1.

3D structure databases

ProteinModelPortaliQ59222.
SMRiQ59222. Positions 33-514.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Lin L.-L., Chu W.S., Hsu W.H.
    Submitted (MAR-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: TS-23Imported.

Entry informationi

Entry nameiQ59222_9BACI
AccessioniPrimary (citable) accession number: Q59222
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.