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Protein

Beta-xylanase

Gene

xynA

Organism
Caldicellulosiruptor bescii (Anaerocellum thermophilum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynAImported
OrganismiCaldicellulosiruptor bescii (Anaerocellum thermophilum)Imported
Taxonomic identifieri31899 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 29HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi521460.Athe_0618.

Structurei

3D structure databases

ProteinModelPortaliQ59150.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini353 – 682GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST330

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105D9F. Bacteria.
COG3693. LUCA.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q59150-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVCLYKRLK RFSVLILVIL FLIVTLIGIE TTKTSRVIGE TKKSFVEYNF
60 70 80 90 100
ENRFIAPFKA SGKSMSLRID NTTAAEGTFS LLASGRKQID DGILLDVTNL
110 120 130 140 150
IDYANEYKIT LYVYHKSSKM QRFVVSSEIE TKSGKKTKLL CEKIIIPKSW
160 170 180 190 200
KKLDANLNLT EQKGIKKVWL KVYVPTSTTN FYVDLFTLKV ADKSHLIKFE
210 220 230 240 250
NFEDKSIAGF ISQDKKCKLS ISKEKAYQGT YSIKVQQTVK RQNTTVILPV
260 270 280 290 300
KGTFEKGKSY SISFYMHQSI LKSLNFAVGI RFLESGKNMR EIVLGRVTIP
310 320 330 340 350
KNKWTEVFAS YTPSLDSKIK DFVIFIRPLS DISYYYIDNF TISDDGWYSA
360 370 380 390 400
VPDLDLPSLR EKYKNYFKIG VAVPYRALTN PVDVAFIKRH FNSITAENEM
410 420 430 440 450
KPEALEPIED NFNFSIADEY LNFCRKNNIA IRGHNLLHQQ TPNWFFENPQ
460 470 480 490 500
TGKKLTNSEK DKKILLERLK KYIQTVVSRY KGRIYAWDVV NEAIDENEPD
510 520 530 540 550
GFRRSDWFNV LGPEYIEKAF IYAHQADPNA QLFYNDYSTE NPVKREYIYK
560 570 580 590 600
LIKSLREKGI PIHGVGLQCH ISVSWPSVEE VEKTIKLFSS IPGIKIHVTE
610 620 630 640 650
IDISVAKEYG EDIDEETKRY LLIQQARKLK DLFDVFKKYK NVVTSVSFWG
660 670 680
LKDDYSWLQG DFPLLFDKDY QPKFAFWSLI DPSVVPEE
Length:688
Mass (Da):79,710
Last modified:November 1, 1996 - v1
Checksum:i1F35FBB45CA77653
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z69782 Genomic DNA. Translation: CAA93627.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z69782 Genomic DNA. Translation: CAA93627.1.

3D structure databases

ProteinModelPortaliQ59150.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521460.Athe_0618.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105D9F. Bacteria.
COG3693. LUCA.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ59150_CALBS
AccessioniPrimary (citable) accession number: Q59150
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.