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Q59102

- RBSP_CUPNH

UniProt

Q59102 - RBSP_CUPNH

Protein

Ribulose bisphosphate carboxylase small chain, plasmid

Gene

cbxSP

Organism
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 2 (15 Jul 1998)
      Previous versions | rss
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    Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

    GO - Molecular functioni

    1. monooxygenase activity Source: UniProtKB-KW
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. reductive pentose-phosphate cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase, Monooxygenase, Oxidoreductase

    Keywords - Biological processi

    Calvin cycle, Carbon dioxide fixation

    Enzyme and pathway databases

    BioCyciCNEC381666:GJUJ-6700-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chain, plasmid (EC:4.1.1.39)
    Short name:
    RuBisCO small subunit
    Gene namesi
    Name:cbxSP
    Synonyms:cbbS, cbbSP, cfxSP, rbcS
    Ordered Locus Names:PHG426
    Encoded oniPlasmid megaplasmid pHG10 Publication
    OrganismiCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
    Taxonomic identifieri381666 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
    ProteomesiUP000008210: Plasmid megaplasmid pHG1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 139139Ribulose bisphosphate carboxylase small chain, plasmidPRO_0000198608Add
    BLAST

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.

    Protein-protein interaction databases

    STRINGi381666.PHG426.

    Structurei

    3D structure databases

    ProteinModelPortaliQ59102.
    SMRiQ59102. Positions 1-129.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.Curated

    Phylogenomic databases

    eggNOGiCOG4451.
    HOGENOMiHOG000141331.
    KOiK01602.
    OrthoDBiEOG6RC3Q7.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q59102-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRITQGTFSF LPDLTDAQIT SQLEYCLNQG WAVGIEYTDD PHPRNTYWEM    50
    FGLPMFDLRD AAGILLEINN ARSTFPNHYI RVTAFDSTHT VESVVMSFIV 100
    NRPADEPGFR LVRQEEPGRT IRYSIESYAV QARPEGSRY 139
    Length:139
    Mass (Da):15,985
    Last modified:July 15, 1998 - v2
    Checksum:i96B373592929C454
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti105 – 1051D → E in AAA83746. (PubMed:7543477)Curated
    Sequence conflicti121 – 1211I → M in AAA83746. (PubMed:7543477)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U20584 Genomic DNA. Translation: AAA83746.1.
    U20585 Genomic DNA. Translation: AAA83748.1.
    AY305378 Genomic DNA. Translation: AAP86175.1.
    PIRiI39558.
    I39560.
    RefSeqiNP_943061.1. NC_005241.1.
    WP_011154338.1. NC_005241.1.

    Genome annotation databases

    EnsemblBacteriaiAAP86175; AAP86175; PHG426.
    GeneIDi2656545.
    KEGGireh:PHG426.
    PATRICi35229364. VBIRalEut6770_0354.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U20584 Genomic DNA. Translation: AAA83746.1 .
    U20585 Genomic DNA. Translation: AAA83748.1 .
    AY305378 Genomic DNA. Translation: AAP86175.1 .
    PIRi I39558.
    I39560.
    RefSeqi NP_943061.1. NC_005241.1.
    WP_011154338.1. NC_005241.1.

    3D structure databases

    ProteinModelPortali Q59102.
    SMRi Q59102. Positions 1-129.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 381666.PHG426.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAP86175 ; AAP86175 ; PHG426 .
    GeneIDi 2656545.
    KEGGi reh:PHG426.
    PATRICi 35229364. VBIRalEut6770_0354.

    Phylogenomic databases

    eggNOGi COG4451.
    HOGENOMi HOG000141331.
    KOi K01602.
    OrthoDBi EOG6RC3Q7.

    Enzyme and pathway databases

    BioCyci CNEC381666:GJUJ-6700-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of the duplicate ribulose-1,5-bisphosphate carboxylase genes and cbb promoters of Alcaligenes eutrophus."
      Kusian B., Bednarski R., Husemann M., Bowien B.
      J. Bacteriol. 177:4442-4450(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete nucleotide sequence of pHG1: a Ralstonia eutropha H16 megaplasmid encoding key enzymes of H(2)-based lithoautotrophy and anaerobiosis."
      Schwartz E., Henne A., Cramm R., Eitinger T., Friedrich B., Gottschalk G.
      J. Mol. Biol. 332:369-383(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337.

    Entry informationi

    Entry nameiRBSP_CUPNH
    AccessioniPrimary (citable) accession number: Q59102
    Secondary accession number(s): Q59103
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: July 15, 1998
    Last modified: October 1, 2014
    This is version 92 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3