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Q59094 (SODM_ACIAD) Reviewed, UniProtKB/Swiss-Prot

Last modified January 22, 2014. Version 97. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Mn]

EC=1.15.1.1
Gene names
Name:sodA
Synonyms:sodM
Ordered Locus Names:ACIAD1070
OrganismAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) [Complete proteome] [HAMAP]
Taxonomic identifier62977 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeAcinetobacter

Protein attributes

Sequence length228 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 manganese ion per subunit By similarity.

Subcellular location

Periplasm Probable.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   Cellular componentPeriplasm
   DomainSignal
   LigandManganese
Metal-binding
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentperiplasmic space

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 228205Superoxide dismutase [Mn]
PRO_0000032903

Sites

Metal binding491Manganese By similarity
Metal binding1001Manganese By similarity
Metal binding1881Manganese By similarity
Metal binding1921Manganese By similarity

Sequences

Sequence LengthMass (Da)Tools
Q59094 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 4475C9AD9FFEE0F8

FASTA22825,741
        10         20         30         40         50         60 
MTRSLKTTLI LLASSVISMS ALAEFKQAPL PYATNALQPA IDQQTMEIHY GKHHKAYVDN 

        70         80         90        100        110        120 
LNAQIKTYPE LDKTDLIQLQ KQISKYNTAV RNNGGGHFNH TFFWESLAAT NKTGQPSPAL 

       130        140        150        160        170        180 
VKQITQDFGS LDAFKQKFNE AASGRFGSGW AWLIVTPNGK LAVTSTPNQD NPLMDLSETK 

       190        200        210        220 
GTPLLGLDVW EHAYYLKYQN RRADYIKAFW SVVNWNKVNE RYNEAIKK 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence of a putative periplasmic Mn superoxide dismutase from Acinetobacter calcoaceticus ADP1."
Geissdoerfer W., Ratajczak A., Hillen W.
Gene 186:305-308(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium."
Barbe V., Vallenet D., Fonknechten N., Kreimeyer A., Oztas S., Labarre L., Cruveiller S., Robert C., Duprat S., Wincker P., Ornston L.N., Weissenbach J., Marliere P., Cohen G.N., Medigue C.
Nucleic Acids Res. 32:5766-5779(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33305 / BD413 / ADP1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z46863 Genomic DNA. Translation: CAA86923.1.
CR543861 Genomic DNA. Translation: CAG67957.1.
PIRJC6320.
RefSeqYP_045779.1. NC_005966.1.

3D structure databases

ProteinModelPortalQ59094.
SMRQ59094. Positions 24-225.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING62977.ACIAD1070.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG67957; CAG67957; ACIAD1070.
GeneID2880832.
KEGGaci:ACIAD1070.
PATRIC20739990. VBIAciSp98416_0959.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMAAIWNVID.
OrthoDBEOG63NMNT.

Enzyme and pathway databases

BioCycASP62977:GJVV-1009-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSODM_ACIAD
AccessionPrimary (citable) accession number: Q59094
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: January 22, 2014
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families