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Protein
Submitted name:

Ornithine decarboxylase

Gene

ODC

Organism
Entamoeba histolytica
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • ornithine decarboxylase activity Source: CACAO

GO - Biological processi

Keywordsi

Molecular functionLyaseImported

Enzyme and pathway databases

BRENDAi4.1.1.17 2080

Names & Taxonomyi

Protein namesi
Submitted name:
Ornithine decarboxylaseImported (EC:4.1.1.17Imported)
Submitted name:
Ornithine decarboxylase, putativeImported
Gene namesi
Name:ODCImported
ORF Names:EHI_100430Imported
OrganismiEntamoeba histolyticaImported
Taxonomic identifieri5759 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba
Proteomesi
  • UP000001926 Componenti: Partially assembled WGS sequence

Organism-specific databases

EuPathDBiAmoebaDB:EHI_100430

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi5759.rna_EHI_100430-1

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4AIBX-ray2.87A/B/C/D1-395[»]
SMRiQ58P26
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 263Orn_Arg_deC_NInterPro annotationAdd BLAST228
Domaini261 – 361Orn_DAP_Arg_deCInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the Orn/Lys/Arg decarboxylase class-II family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0622 Eukaryota
COG0019 LUCA
KOiK01581
OMAiNDKFSSG

Family and domain databases

Gene3Di2.40.37.102 hits
3.20.20.101 hit
InterProiView protein in InterPro
IPR009006 Ala_racemase/Decarboxylase_C
IPR022643 De-COase2_C
IPR022657 De-COase2_CS
IPR022644 De-COase2_N
IPR022653 De-COase2_pyr-phos_BS
IPR000183 Orn/DAP/Arg_de-COase
IPR002433 Orn_de-COase
IPR029066 PLP-binding_barrel
PfamiView protein in Pfam
PF02784 Orn_Arg_deC_N, 1 hit
PF00278 Orn_DAP_Arg_deC, 1 hit
PRINTSiPR01179 ODADCRBXLASE
PR01182 ORNDCRBXLASE
SUPFAMiSSF50621 SSF50621, 1 hit
SSF51419 SSF51419, 1 hit
PROSITEiView protein in PROSITE
PS00878 ODR_DC_2_1, 1 hit
PS00879 ODR_DC_2_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q58P26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQTSLEVKE FALNLISQFE PENQPLGFWI FDTEGVEKAV ERWKKNMPTV
60 70 80 90 100
RPCFAVKCNP EPHLVKLLGE LGCGFDCASL NEIKEVLDLG FNPEDITYSQ
110 120 130 140 150
TFKPYNQLIE ASHLGINHTI VDSIDEVQKI AKYAPKMGIM IRIMENDTSA
160 170 180 190 200
GHVFGEKFGL HDDEVEIVLK EIKDKGLNLD GVHFHVGSDS HNSEVFTKAL
210 220 230 240 250
TKARNTVTLA EQFGMKPYLI DIGGGFSQVA PFEEFAATIE KTIKELEFPE
260 270 280 290 300
RTRFIAEPGR YMASNAFHLV SSLHGKRVRI QNGKKQIEYT SGDGLHGSFG
310 320 330 340 350
CCIWFEKQKS CECITQKVNE NTKMYESIIY GPSCNGSDKV ATQELPEMEP
360 370 380 390 400
GKDWLLFPNM GAYTISMATN FNGFEERNHV IYTLPLKSTK IIQIPKSIEC
410
NSVPSLNGIP HYA
Length:413
Mass (Da):46,432
Last modified:April 26, 2005 - v1
Checksum:iBEB7F00C87870E45
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY929249 Genomic DNA Translation: AAX35675.1
KT716494 Genomic DNA Translation: AME17988.1
DS571201 Genomic DNA Translation: EAL49727.1
RefSeqiXP_655113.1, XM_650021.1

Genome annotation databases

EnsemblProtistsiGAT94805; GAT94805; CL6EHI_100430
rna_EHI_100430-1; rna_EHI_100430-1; EHI_100430
GeneIDi3409429
KEGGiehi:EHI_100430

Similar proteinsi

Entry informationi

Entry nameiQ58P26_ENTHI
AccessioniPrimary (citable) accession number: Q58P26
Secondary accession number(s): C4M0T2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: February 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported