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Q58P26 (Q58P26_ENTHI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Ornithine decarboxylase, putative EMBL EAL49727.1
Gene names
ORF Names:EHI_100430 EMBL EAL49727.1
OrganismEntamoeba histolytica [Reference proteome] EMBL AAX35675.1
Taxonomic identifier5759 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaArchamoebaeEntamoebidaeEntamoeba

Protein attributes

Sequence length413 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Ontologies

Keywords
   Biological processPolyamine biosynthesis RuleBase RU003739
   Technical term3D-structure PDB 4AIB
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processpolyamine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q58P26 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: BEB7F00C87870E45

FASTA41346,432
        10         20         30         40         50         60 
MKQTSLEVKE FALNLISQFE PENQPLGFWI FDTEGVEKAV ERWKKNMPTV RPCFAVKCNP 

        70         80         90        100        110        120 
EPHLVKLLGE LGCGFDCASL NEIKEVLDLG FNPEDITYSQ TFKPYNQLIE ASHLGINHTI 

       130        140        150        160        170        180 
VDSIDEVQKI AKYAPKMGIM IRIMENDTSA GHVFGEKFGL HDDEVEIVLK EIKDKGLNLD 

       190        200        210        220        230        240 
GVHFHVGSDS HNSEVFTKAL TKARNTVTLA EQFGMKPYLI DIGGGFSQVA PFEEFAATIE 

       250        260        270        280        290        300 
KTIKELEFPE RTRFIAEPGR YMASNAFHLV SSLHGKRVRI QNGKKQIEYT SGDGLHGSFG 

       310        320        330        340        350        360 
CCIWFEKQKS CECITQKVNE NTKMYESIIY GPSCNGSDKV ATQELPEMEP GKDWLLFPNM 

       370        380        390        400        410 
GAYTISMATN FNGFEERNHV IYTLPLKSTK IIQIPKSIEC NSVPSLNGIP HYA 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the protist parasite Entamoeba histolytica."
Loftus B.J., Anderson I., Davies R., Alsmark U.C., Samuelson J., Amedeo P., Roncaglia P., Berriman M., Hirt R.P., Mann B.J., Nozaki T., Suh B., Pop M., Duchene M., Ackers J., Tannich E., Leippe M., Hofer M. expand/collapse author list , Bruchhaus I., Willhoeft U., Bhattacharya A., Chillingworth T., Churcher C.M., Hance Z., Harris B., Harris D., Jagels K., Moule S., Mungall K.L., Ormond D., Squares R., Whitehead S., Quail M.A., Rabbinowitsch E., Norbertczak H., Price C., Wang Z., Guillen N., Gilchrist C., Stroup S.E., Bhattacharya S., Lohia A., Foster P.G., Sicheritz-Ponten T., Weber C., Singh U., Mukherjee C., El-Sayed N.M.A., Petri W.A., Clark C.G., Embley T.M., Barrell B.G., Fraser C.M., Hall N.
Nature 433:865-868(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 30459 / HM-1:IMSS.
[2]Prasad K.P., Madhubala R.
Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Lorenzi H., Amedeo P., Inman J., Schobel S., Caler E.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 30459 / HM-1:IMSS.
[4]"Structural insight into DFMO resistant ornithine decarboxylase from Entamoeba histolytica: an inkling to adaptive evolution."
Preeti, Tapas S., Kumar P., Madhubala R., Tomar S.
PLoS ONE 8:e53397-e53397(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.87 ANGSTROMS) OF 1-395.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY929249 Genomic DNA. Translation: AAX35675.1.
DS571201 Genomic DNA. Translation: EAL49727.1.
RefSeqXP_655113.1. XM_650021.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AIBX-ray2.87A/B/C/D1-395[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING294381.C4M0T2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsrna_EHI_100430-1; rna_EHI_100430-1; EHI_100430.
GeneID3409429.
KEGGehi:EHI_100430.

Organism-specific databases

EuPathDBAmoebaDB:EHI_100430.

Phylogenomic databases

KOK01581.
ProtClustDBCLSZ2732231.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMSSF50621. SSF50621. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ58P26_ENTHI
AccessionPrimary (citable) accession number: Q58P26
Secondary accession number(s): C4M0T2
Entry history
Integrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: March 19, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)