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Reviewed, UniProtKB/Swiss-Prot Q58A44 (PCOTH_HUMAN)

Last modified November 4, 2008. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Protein PCOTH
Alternative name(s):
    Prostate collagen triple helix protein
Gene names
Name: PCOTH
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length107 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

May be involved in growth and survival of prostate cancer cells through the TAF-Ibeta pathway.

Subcellular location

Cytoplasm.

Tissue specificity

Expressed in prostate and testis. Weakly or not expressed in other tissues. Overexpressed in prostate cancers.

Ontologies

Keywords

   Cellular componentCytoplasm

Gene Ontology (GO)

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 107107Protein PCOTH
PRO_0000337141

Regions

Compositional bias35 – 10773Pro-rich

Sequences

Sequence LengthMass (Da)Tools
Q58A44-1 [UniParc].

Last modified May 20, 2008. Version 2.
Checksum: B738A5D9E95AF097

FASTA10710,968
        10         20         30         40         50         60 
MWILSNLMGT SEEGNLLSTV SPTVKALFGK TRVSPIFPFS PRSPFQPLIP RTPGSPWGPV 

        70         80         90        100 
GPASPLGPGF PIGPMGPGKP VGPKGPMLPL GPSGPVGPTS PLFPFCP 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Prostatic carcinoma.
[2]"PCOTH, a novel gene overexpressed in prostate cancers, promotes prostate cancer cell growth through phosphorylation of oncoprotein TAF-Ibeta/SET."
Anazawa Y., Nakagawa H., Furihara M., Ashida S., Tamura K., Yoshioka H., Shuin T., Fujioka T., Katagiri T., Nakamura Y.
Cancer Res. 65:4578-4586(2005) [PubMed: 15930275] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 7-107, POSSIBLE FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
Tissue: Prostatic carcinoma.

Cross-references

Sequence databases

BC015452 mRNA. No translation available.
AB113650 mRNA. Translation: BAD93185.1.
RefSeqNP_001014442.2.
UniGeneHs.642624

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblENSG00000205861. Homo sapiens. [Contig view]
GeneID542767.
KEGGhsa:542767.

Organism-specific databases

GeneCardsSearch...

Phylogenomic databases

HOGENOMQ58A44.
HOVERGENQ58A44.

Family and domain databases

ProtoNetSearch...

Other Resources

NextBio112120.

Entry information

Entry namePCOTH_HUMAN
AccessionPrimary (citable) accession number: Q58A44
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 4, 2008
This is version 19 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 13

Human chromosome 13: entries, gene names and cross-references to MIM

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents