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Q586C2

- Q586C2_TRYB2

UniProt

Q586C2 - Q586C2_TRYB2

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Protein
Submitted name:

40S ribosomal protein S13, putative

Gene

Tb10.61.1390

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: GeneDB_Tbrucei
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein S13, putativeImported
Gene namesi
ORF Names:Tb10.61.1390Imported, Tb927.2.5910Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb927.2.5910.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZEYelectron microscopy5.57G1-151[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0184.
HOGENOMiHOG000180723.
KOiK02953.
OMAiNWKYESA.

Family and domain databases

HAMAPiMF_01343_A. Ribosomal_S15_A.
InterProiIPR012606. Ribosomal_S13/S15_N.
IPR000589. Ribosomal_S15.
IPR023029. Ribosomal_S15P.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF08069. Ribosomal_S13_N. 1 hit.
PF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q586C2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVRMHGNGHG KAASALPYRR TPPTWLKSSS RDVIDAVCKL AKKGLSPSRI
60 70 80 90 100
GMQLRDSMGI AQVKNVTGRK ILRILKHKGM APEIPEDLYC LIKRATQMRK
110 120 130 140 150
HLERNTKDKD TKFRLILVES RIHRLARYYR RVKQLPPTWK YESSTASAMV

A
Length:151
Mass (Da):17,309
Last modified:May 30, 2006 - v1
Checksum:i467AFCAD23E630FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017170 Genomic DNA. Translation: AAQ16048.1.
AC008368 Genomic DNA. Translation: AAX79010.1.
CM000208 Genomic DNA. Translation: EAN78873.1.
RefSeqiXP_827985.1. XM_822892.1.
XP_951734.1. XM_946641.1.

Genome annotation databases

GeneIDi3655892.
3662679.
KEGGitbr:Tb10.61.1390.
tbr:Tb927.2.5910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017170 Genomic DNA. Translation: AAQ16048.1 .
AC008368 Genomic DNA. Translation: AAX79010.1 .
CM000208 Genomic DNA. Translation: EAN78873.1 .
RefSeqi XP_827985.1. XM_822892.1.
XP_951734.1. XM_946641.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZEY electron microscopy 5.57 G 1-151 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb927.2.5910.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3655892.
3662679.
KEGGi tbr:Tb10.61.1390.
tbr:Tb927.2.5910.

Phylogenomic databases

eggNOGi COG0184.
HOGENOMi HOG000180723.
KOi K02953.
OMAi NWKYESA.

Family and domain databases

HAMAPi MF_01343_A. Ribosomal_S15_A.
InterProi IPR012606. Ribosomal_S13/S15_N.
IPR000589. Ribosomal_S15.
IPR023029. Ribosomal_S15P.
IPR009068. S15_NS1_RNA-bd.
[Graphical view ]
Pfami PF08069. Ribosomal_S13_N. 1 hit.
PF00312. Ribosomal_S15. 1 hit.
[Graphical view ]
SUPFAMi SSF47060. SSF47060. 1 hit.
PROSITEi PS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  2. El-Sayed N.M., Khalak H., Adams M.D.
    Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  5. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  6. Haas B., Blandin G., El-Sayed N.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  7. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ586C2_TRYB2
AccessioniPrimary (citable) accession number: Q586C2
Secondary accession number(s): D7SG72
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: November 26, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3