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Protein
Submitted name:

40S ribosomal protein S13, putative

Gene

Tb10.61.1390

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein S13, putativeImported
Gene namesi
ORF Names:Tb10.61.1390Imported, Tb927.2.5910Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
Proteomesi
  • UP000008524 Componentsi: Chromosome 10, Chromosome 2

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57AG1-151[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 6060Ribosomal_S13_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S15P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000180723.
KOiK02953.
OMAiWHLVKKA.

Family and domain databases

CDDicd00353. Ribosomal_S15p_S13e. 1 hit.
HAMAPiMF_01343_A. Ribosomal_S15_A. 1 hit.
InterProiIPR012606. Ribosomal_S13/S15_N.
IPR000589. Ribosomal_S15.
IPR023029. Ribosomal_S15P.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF08069. Ribosomal_S13_N. 1 hit.
PF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SMARTiSM01386. Ribosomal_S13_N. 1 hit.
SM01387. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q586C2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRMHGNGHG KAASALPYRR TPPTWLKSSS RDVIDAVCKL AKKGLSPSRI
60 70 80 90 100
GMQLRDSMGI AQVKNVTGRK ILRILKHKGM APEIPEDLYC LIKRATQMRK
110 120 130 140 150
HLERNTKDKD TKFRLILVES RIHRLARYYR RVKQLPPTWK YESSTASAMV

A
Length:151
Mass (Da):17,309
Last modified:May 30, 2006 - v1
Checksum:i467AFCAD23E630FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017150 Genomic DNA. Translation: AAQ16048.1.
AC008368 Genomic DNA. Translation: AAX79010.1.
CM000208 Genomic DNA. Translation: EAN78873.1.
RefSeqiXP_827985.1. XM_822892.1.
XP_951734.1. XM_946641.1.

Genome annotation databases

EnsemblProtistsiAAQ16048; AAQ16048; Tb927.2.5910.
EAN78873; EAN78873; Tb10.61.1390.
GeneDBiTb927.10.15120:pep.
Tb927.2.5910:pep.
GeneIDi3655892.
3662679.
KEGGitbr:Tb10.61.1390.
tbr:Tb927.2.5910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017150 Genomic DNA. Translation: AAQ16048.1.
AC008368 Genomic DNA. Translation: AAX79010.1.
CM000208 Genomic DNA. Translation: EAN78873.1.
RefSeqiXP_827985.1. XM_822892.1.
XP_951734.1. XM_946641.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57AG1-151[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiAAQ16048; AAQ16048; Tb927.2.5910.
EAN78873; EAN78873; Tb10.61.1390.
GeneDBiTb927.10.15120:pep.
Tb927.2.5910:pep.
GeneIDi3655892.
3662679.
KEGGitbr:Tb10.61.1390.
tbr:Tb927.2.5910.

Phylogenomic databases

HOGENOMiHOG000180723.
KOiK02953.
OMAiWHLVKKA.

Family and domain databases

CDDicd00353. Ribosomal_S15p_S13e. 1 hit.
HAMAPiMF_01343_A. Ribosomal_S15_A. 1 hit.
InterProiIPR012606. Ribosomal_S13/S15_N.
IPR000589. Ribosomal_S15.
IPR023029. Ribosomal_S15P.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF08069. Ribosomal_S13_N. 1 hit.
PF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SMARTiSM01386. Ribosomal_S13_N. 1 hit.
SM01387. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ586C2_TRYB2
AccessioniPrimary (citable) accession number: Q586C2
Secondary accession number(s): D7SG72
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: September 7, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.