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Protein

Probable branched-chain amino acid transport ATP-binding protein LivG

Gene

livG

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Probable component of a branched-chain amino-acid transport system.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi40 – 478ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Amino-acid transport, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable branched-chain amino acid transport ATP-binding protein LivG
Gene namesi
Name:livG
Ordered Locus Names:MJ1267
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 257257Probable branched-chain amino acid transport ATP-binding protein LivGPRO_0000092412Add
BLAST

Interactioni

Subunit structurei

Monomer.

Protein-protein interaction databases

STRINGi243232.MJ_1267.

Structurei

Secondary structure

1
257
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi6 – 1712Combined sources
Beta strandi20 – 267Combined sources
Beta strandi29 – 313Combined sources
Beta strandi35 – 395Combined sources
Helixi46 – 538Combined sources
Beta strandi60 – 667Combined sources
Helixi76 – 827Combined sources
Beta strandi84 – 863Combined sources
Helixi92 – 965Combined sources
Helixi99 – 1046Combined sources
Helixi105 – 1073Combined sources
Helixi114 – 1207Combined sources
Helixi128 – 14013Combined sources
Helixi144 – 1463Combined sources
Helixi151 – 1533Combined sources
Helixi156 – 16914Combined sources
Beta strandi173 – 1797Combined sources
Turni180 – 1834Combined sources
Helixi186 – 20116Combined sources
Beta strandi205 – 2095Combined sources
Helixi213 – 2164Combined sources
Helixi217 – 2193Combined sources
Beta strandi221 – 2277Combined sources
Beta strandi230 – 2378Combined sources
Helixi238 – 2469Combined sources
Helixi248 – 2525Combined sources
Turni253 – 2564Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1G6HX-ray1.60A1-257[»]
1G9XX-ray2.60A/B/C1-257[»]
1GAJX-ray2.50A1-257[»]
ProteinModelPortaliQ58663.
SMRiQ58663. Positions 4-257.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ58663.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 253246ABC transporterPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated
Contains 1 ABC transporter domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiarCOG00925. Archaea.
COG0411. LUCA.
InParanoidiQ58663.
KOiK01995.
OMAiFRTPGFK.
PhylomeDBiQ58663.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q58663-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDTMEILRT ENIVKYFGEF KALDGVSISV NKGDVTLIIG PNGSGKSTLI
60 70 80 90 100
NVITGFLKAD EGRVYFENKD ITNKEPAELY HYGIVRTFQT PQPLKEMTVL
110 120 130 140 150
ENLLIGEINP GESPLNSLFY KKWIPKEEEM VEKAFKILEF LKLSHLYDRK
160 170 180 190 200
AGELSGGQMK LVEIGRALMT NPKMIVMDEP IAGVAPGLAH DIFNHVLELK
210 220 230 240 250
AKGITFLIIE HRLDIVLNYI DHLYVMFNGQ IIAEGRGEEE IKNVLSDPKV

VEIYIGE
Length:257
Mass (Da):28,995
Last modified:November 1, 1996 - v1
Checksum:iB3347C3277D09C12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99273.1.
PIRiB64458.

Genome annotation databases

EnsemblBacteriaiAAB99273; AAB99273; MJ_1267.
KEGGimja:MJ_1267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99273.1.
PIRiB64458.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1G6HX-ray1.60A1-257[»]
1G9XX-ray2.60A/B/C1-257[»]
1GAJX-ray2.50A1-257[»]
ProteinModelPortaliQ58663.
SMRiQ58663. Positions 4-257.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243232.MJ_1267.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB99273; AAB99273; MJ_1267.
KEGGimja:MJ_1267.

Phylogenomic databases

eggNOGiarCOG00925. Archaea.
COG0411. LUCA.
InParanoidiQ58663.
KOiK01995.
OMAiFRTPGFK.
PhylomeDBiQ58663.

Miscellaneous databases

EvolutionaryTraceiQ58663.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.
  2. "Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter."
    Karpowich N., Martsinkevich O., Millen L., Yuan Y.-R., Dai P.L., MacVey K., Thomas P.J., Hunt J.F.
    Structure 9:571-586(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS).

Entry informationi

Entry nameiLIVG_METJA
AccessioniPrimary (citable) accession number: Q58663
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: November 1, 1996
Last modified: November 11, 2015
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.