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Protein

UPF0251 protein MJ1243

Gene

MJ1243

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0251 protein MJ1243
Gene namesi
Ordered Locus Names:MJ1243
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001475761 – 123UPF0251 protein MJ1243Add BLAST123

Interactioni

Protein-protein interaction databases

STRINGi243232.MJ_1243.

Structurei

3D structure databases

ProteinModelPortaliQ58640.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0251 family.Curated

Phylogenomic databases

eggNOGiarCOG02238. Archaea.
COG1342. LUCA.
InParanoidiQ58640.
KOiK06933.
OMAiKIRECGF.
PhylomeDBiQ58640.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_00674. UPF0251. 1 hit.
InterProiIPR013324. RNA_pol_sigma_r3_r4.
IPR002852. UPF0251.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF02001. DUF134. 1 hit.
[Graphical view]
SUPFAMiSSF88659. SSF88659. 1 hit.

Sequencei

Sequence statusi: Complete.

Q58640-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRRGRPKIP RFISEEPKFR IFKPHGVSLT EVDKVILSVD ELEAIRLVDY
60 70 80 90 100
LDYTQEEASK LMGISRRVLW SLLTEGRKKI ADALINGKAI VIEGGEYKIR
110 120
ECGFCMRHRF GIKKHCRTWR EEL
Length:123
Mass (Da):14,391
Last modified:November 1, 1996 - v1
Checksum:i2DC553451B5E1F19
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99248.1.
PIRiB64455.
RefSeqiWP_010870755.1. NC_000909.1.

Genome annotation databases

EnsemblBacteriaiAAB99248; AAB99248; MJ_1243.
GeneIDi1452139.
KEGGimja:MJ_1243.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99248.1.
PIRiB64455.
RefSeqiWP_010870755.1. NC_000909.1.

3D structure databases

ProteinModelPortaliQ58640.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243232.MJ_1243.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB99248; AAB99248; MJ_1243.
GeneIDi1452139.
KEGGimja:MJ_1243.

Phylogenomic databases

eggNOGiarCOG02238. Archaea.
COG1342. LUCA.
InParanoidiQ58640.
KOiK06933.
OMAiKIRECGF.
PhylomeDBiQ58640.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_00674. UPF0251. 1 hit.
InterProiIPR013324. RNA_pol_sigma_r3_r4.
IPR002852. UPF0251.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF02001. DUF134. 1 hit.
[Graphical view]
SUPFAMiSSF88659. SSF88659. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY1243_METJA
AccessioniPrimary (citable) accession number: Q58640
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2003
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.