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Q584U5

- Q584U5_TRYB2

UniProt

Q584U5 - Q584U5_TRYB2

Protein
Submitted name:

40S ribosomal protein S30, putative

Gene

Tb927.6.2110

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein S30, putativeImported
    Gene namesi
    ORF Names:Tb927.6.2110Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 6

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb927.6.2110.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZEYelectron microscopy5.57Y1-66[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG285974.
    HOGENOMiHOG000202227.
    KOiK02983.
    OMAiCTASKEH.

    Family and domain databases

    InterProiIPR006846. Ribosomal_S30.
    [Graphical view]
    PfamiPF04758. Ribosomal_S30. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q584U5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGKVHGSLAR AGKVKNQTPK VSKQEKKKQP RGRAFKRLKY TQRYLAKTLK   50
    AGEKLRMNKQ PPGKAG 66
    Length:66
    Mass (Da):7,433
    Last modified:May 10, 2005 - v1
    Checksum:iF7CFDB520E491658
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC074259 Genomic DNA. Translation: AAX80895.1.
    CP000069 Genomic DNA. Translation: AAZ11773.1.
    RefSeqiXP_845332.1. XM_840239.1.

    Genome annotation databases

    EnsemblProtistsiAAZ11773; AAZ11773; Tb927.6.2110.
    GeneIDi3657843.
    KEGGitbr:Tb927.6.2110.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC074259 Genomic DNA. Translation: AAX80895.1 .
    CP000069 Genomic DNA. Translation: AAZ11773.1 .
    RefSeqi XP_845332.1. XM_840239.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZEY electron microscopy 5.57 Y 1-66 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb927.6.2110.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi AAZ11773 ; AAZ11773 ; Tb927.6.2110 .
    GeneIDi 3657843.
    KEGGi tbr:Tb927.6.2110.

    Phylogenomic databases

    eggNOGi NOG285974.
    HOGENOMi HOG000202227.
    KOi K02983.
    OMAi CTASKEH.

    Family and domain databases

    InterProi IPR006846. Ribosomal_S30.
    [Graphical view ]
    Pfami PF04758. Ribosomal_S30. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. El-Sayed N.M., Khalak H., Adams M.D.
      Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    4. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    5. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
      Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
      , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    6. Haas B., Blandin G., El-Sayed N.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    7. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ584U5_TRYB2
    AccessioniPrimary (citable) accession number: Q584U5
    Secondary accession number(s): D6XHU4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3