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Protein
Submitted name:

60S ribosomal protein L4

Gene

Tb927.3.5050

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L4Imported
Gene namesi
ORF Names:Tb927.3.5050Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
Proteomesi
  • UP000008524 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiTriTrypDB:Tb927.3.5050.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57Br1-374[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini273 – 349Ribos_L4_asso_CInterPro annotationAdd BLAST77

Phylogenomic databases

HOGENOMiHOG000107331.
KOiK02930.
OMAiQGARNHP.

Family and domain databases

Gene3Di3.40.1370.10. 1 hit.
InterProiIPR025755. Ribos_L4_C_dom.
IPR002136. Ribosomal_L4/L1e.
IPR013000. Ribosomal_L4/L1e_euk/arc_CS.
IPR023574. Ribosomal_L4_dom.
[Graphical view]
PfamiPF14374. Ribos_L4_asso_C. 1 hit.
PF00573. Ribosomal_L4. 1 hit.
[Graphical view]
SUPFAMiSSF52166. SSF52166. 1 hit.
PROSITEiPS00939. RIBOSOMAL_L1E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q582N2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTARPSVSVY SASEDKVVGT CSLPAVFTAP IRHDVVQFVH TNMAKNSRQP
60 70 80 90 100
YAVNRLSGMK HSAESWGTGR AVARIPRIHG GGTSMSGAGA FGNMCRGGRM
110 120 130 140 150
FAPTKIFRRW HRKINLHQKR FAVVSALAAS SLPALVMSRG HKIENVAEVP
160 170 180 190 200
LVVEDGVRAY EKTKEAMTFL KTVGAIDDVN RVNDSRQIRA GRGKMRNRRY
210 220 230 240 250
VARRGPMLVM PDNKGTRAFR NIFGLDLANV NSLNLLHLAP GGHVGRFIIW
260 270 280 290 300
TKSAFEKLDK IFGTFTEPST VKSGFMLPAP MLTSTDVTRI MQSEEVRRVL
310 320 330 340 350
KPKKLQPKRP SRYRQPTNGI RNRRLRLRLN PFQKKEKAMA KGMQNKKNRE
360 370
ARHAAKVVRL AKARKNVAKA LKKK
Length:374
Mass (Da):41,856
Last modified:May 10, 2005 - v1
Checksum:i82405438786F917B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091483 Genomic DNA. Translation: AAX80672.1.
CP000066 Genomic DNA. Translation: AAZ10536.1.
RefSeqiXP_844095.1. XM_839002.1.

Genome annotation databases

EnsemblProtistsiAAZ10536; AAZ10536; Tb927.3.5050.
GeneDBiTb927.3.5050:pep.
GeneIDi3656445.
KEGGitbr:Tb927.3.5050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091483 Genomic DNA. Translation: AAX80672.1.
CP000066 Genomic DNA. Translation: AAZ10536.1.
RefSeqiXP_844095.1. XM_839002.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57Br1-374[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiAAZ10536; AAZ10536; Tb927.3.5050.
GeneDBiTb927.3.5050:pep.
GeneIDi3656445.
KEGGitbr:Tb927.3.5050.

Organism-specific databases

EuPathDBiTriTrypDB:Tb927.3.5050.

Phylogenomic databases

HOGENOMiHOG000107331.
KOiK02930.
OMAiQGARNHP.

Family and domain databases

Gene3Di3.40.1370.10. 1 hit.
InterProiIPR025755. Ribos_L4_C_dom.
IPR002136. Ribosomal_L4/L1e.
IPR013000. Ribosomal_L4/L1e_euk/arc_CS.
IPR023574. Ribosomal_L4_dom.
[Graphical view]
PfamiPF14374. Ribos_L4_asso_C. 1 hit.
PF00573. Ribosomal_L4. 1 hit.
[Graphical view]
SUPFAMiSSF52166. SSF52166. 1 hit.
PROSITEiPS00939. RIBOSOMAL_L1E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ582N2_TRYB2
AccessioniPrimary (citable) accession number: Q582N2
Secondary accession number(s): D6XE59
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: November 2, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.