Reviewed, UniProtKB/Swiss-Prot Q58206 (Y796_METJA)

Names and origin

Protein names

Recommended name:
    Uncharacterized ABC transporter ATP-binding protein MJ0796

Gene names

Ordered Locus Names:

MJ0796

Organism

Methanocaldococcus jannaschii (Methanococcus jannaschii) [Complete proteome] [HAMAP]

Taxonomic identifier

2190 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter family. Contains 1 ABC transporter domain.

Ontologies

Keywords
Biological process	Transport
Ligand	ATP-binding Nucleotide-binding
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological process	transport Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 235

235

Uncharacterized ABC transporter ATP-binding protein MJ0796

PRO_0000093221

Regions

Domain

2 – 235

234

ABC transporter

Nucleotide binding

38 – 45

8

ATP Potential

Secondary structure

1

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235

Helix Strand Turn

Details...

Beta strand

2 – 13

12

Beta strand

16 – 28

13

Beta strand

33 – 37

5

Helix

44 – 51

8

Beta strand

58 – 64

7

Helix

74 – 84

11

Beta strand

85 – 88

4

Helix

100 – 109

10

Helix

118 – 131

14

Helix

136 – 138

3

Helix

143 – 145

3

Helix

148 – 160

13

Beta strand

165 – 171

7

Turn

172 – 175

4

Helix

178 – 193

16

Beta strand

198 – 202

5

Helix

206 – 209

4

Beta strand

212 – 219

8

Beta strand

222 – 228

7

Sequences

	Sequence		Length	Mass (Da)
	Q58206-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: C3035AE896099E72	FASTA	235	26,566
	10 20 30 40 50 60 MIKLKNVTKT YKMGEEIIYA LKNVNLNIKE GEFVSIMGPS GSGKSTMLNI IGCLDKPTEG 70 80 90 100 110 120 EVYIDNIKTN DLDDDELTKI RRDKIGFVFQ QFNLIPLLTA LENVELPLIF KYRGAMSGEE 130 140 150 160 170 180 RRKRALECLK MAELEERFAN HKPNQLSGGQ QQRVAIARAL ANNPPIILAD EPTGALDSKT 190 200 210 220 230 GEKIMQLLKK LNEEDGKTVV VVTHDINVAR FGERIIYLKD GEVEREEKLR GFDDR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.
[2]	"The crystal structure of the MJ0796 ATP-binding cassette. Implications for the structural consequences of ATP hydrolysis in the active site of an ABC transporter." Yuan Y.-R., Blecker S., Martsinkevich O., Millen L., Thomas P.J., Hunt J.F. J. Biol. Chem. 276:32313-32321(2001) [PubMed: 11402022] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS).
[3]	"ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer." Smith P.C., Karpowich N., Millen L., Moody J.E., Rosen J., Thomas P.J., Hunt J.F. Mol. Cell 10:139-149(2002) [PubMed: 12150914] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF MUTANT GLN-171.

Cross-references

Sequence databases

EMBLGenBankDDBJ

L77117 Genomic DNA. Translation: AAB98791.1.

PIR

D64399.

RefSeq

NP_247785.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1F3O	X-ray	2.70	A	1-235	[»]
1L2T	X-ray	1.90	A/B	1-235	[»]

ModBase

Search...

Genome annotation databases

GeneID

1451677.

GenomeReviews

Gene locus MJ0796 in contig L77117_GR.

KEGG

mja:MJ0796.

NMPDR

fig|243232.1.peg.822.

TIGR

MJ0796.

Phylogenomic databases

HOGENOM

Q58206.

OMA

Q58206. FQTFNLV.

Enzyme and pathway databases

BioCyc

MJAN243232:MJ_0796-MON.

Family and domain databases

InterPro

IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR003593. ATPase_AAA+_core.
[Graphical view]

Pfam

PF00005. ABC_tran. 1 hit.
[Graphical view]

ProDom

PD000006. ABC_transporter. 1 hit.
[Graphical view] [Entries sharing at least one domain]

SMART

SM00382. AAA. 1 hit.
[Graphical view]

PROSITE

PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Y796_METJA

Accession

Primary (citable) accession number: Q58206

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)